CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF12
(
Choloepus hoffmanni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCHOG00000013201
T089026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.797
0.922
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.797
0.922
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.797
0.922
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000011687
C2H2 ZF
266
288
YDCNECGKSFCKKSKFIIHQRIH
ENSCHOP00000011687
C2H2 ZF
294
316
YKCNVCGKSFCQKGTLTVHQRTH
ENSCHOP00000011687
C2H2 ZF
322
344
YECNECGKTFYQKLHLIQHLRIH
ENSCHOP00000011687
C2H2 ZF
350
372
YECSYCGKSFCQKTHLTQHQRTH
ENSCHOP00000011687
C2H2 ZF
378
400
YPCNECGKSFSQKSALNDHQKIH
ENSCHOP00000011687
C2H2 ZF
406
428
HKCNECGKCFCRKSTLTTHQRTH
ENSCHOP00000011687
C2H2 ZF
434
456
YECNECGKSFSRLSYLTVHYRTH
ENSCHOP00000011687
C2H2 ZF
462
484
YECNDCGKTFYLNSALIRHQRVH
ENSCHOP00000011687
C2H2 ZF
490
512
YECNECGKVFSQLSYLNIHHRTH
ENSCHOP00000011687
C2H2 ZF
518
540
YECNECGKSFYQNSALCRHRRIH
ENSCHOP00000011687
C2H2 ZF
546
568
YECYICGKFFSQMSYLTIHHRIH
ENSCHOP00000011687
C2H2 ZF
574
596
YECNECGKTFCQSSALSRHQRTH
ENSCHOP00000011687
C2H2 ZF
602
624
YECYECGKFFSQMSYLTIHHRIH
ENSCHOP00000011687
C2H2 ZF
630
652
FECNECGKAFSRMSYLTVHYRTH
ENSCHOP00000011687
C2H2 ZF
658
680
YECNECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Choloepus hoffmanni
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy