CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLIS1
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000004690
T089290_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.827
1.000
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.827
1.000
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.827
1.000
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000008518
C2H2 ZF
3
22
EGCSKAFSRLENLKIHLRSH
ENSCJAP00000008518
C2H2 ZF
28
52
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSCJAP00000008518
C2H2 ZF
58
82
YACQIPGCSKRYTDPSSLRKHVKAH
ENSCJAP00000008528
C2H2 ZF
231
258
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSCJAP00000008528
C2H2 ZF
265
288
KCMFEGCSKAFSRLENLKIHLRSH
ENSCJAP00000008528
C2H2 ZF
294
318
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSCJAP00000008528
C2H2 ZF
324
348
YACQIPGCSKRYTDPSSLRKHVKAH
ENSCJAP00000043871
C2H2 ZF
231
258
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSCJAP00000043871
C2H2 ZF
265
288
KCMFEGCSKAFSRLENLKIHLRSH
ENSCJAP00000043871
C2H2 ZF
294
318
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSCJAP00000043871
C2H2 ZF
324
348
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy