ZNF18 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000004790 T089293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.819 0.991
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.819 0.991
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.819 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000008748 C2H2 ZF 408 429
ENSCJAP00000008748 C2H2 ZF 435 457
ENSCJAP00000008748 C2H2 ZF 463 485
ENSCJAP00000008748 C2H2 ZF 491 513
ENSCJAP00000008748 C2H2 ZF 519 541

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF18 Pan troglodytes ENSPTRG00000008782 I 0.827
ENSPPYG00000007992 Pongo abelii ENSPPYG00000007992 I 0.827
ENSNLEG00000014526 Nomascus leucogenys ENSNLEG00000014526 I 0.827
ENSTSYG00000006855 Tarsius syrichta ENSTSYG00000006855 I 0.825
ENSSTOG00000012652 Ictidomys tridecemlineatus ENSSTOG00000012652 I 0.825
ZNF18 Oryctolagus cuniculus ENSOCUG00000010095 I 0.825
ZNF18 Otolemur garnettii ENSOGAG00000027830 I 0.821
ZNF18 Homo sapiens ENSG00000154957 D 0.819
ZNF18 Microcebus murinus ENSMICG00000016196 I 0.819
ZNF18 Tupaia belangeri ENSTBEG00000007103 I 0.818
ZNF18 Erinaceus europaeus ENSEEUG00000011943 I 0.817
ZNF18 Choloepus hoffmanni ENSCHOG00000001767 I 0.816
ZNF18 Canis familiaris ENSCAFG00000017843 I 0.816
ZNF18 Equus caballus ENSECAG00000025164 I 0.816
ZNF18 Pteropus vampyrus ENSPVAG00000014085 I 0.816
ENSAMEG00000013156 Ailuropoda melanoleuca ENSAMEG00000013156 I 0.816
ZNF18 Echinops telfairi ENSETEG00000000611 I 0.816
ZNF18 Sorex araneus ENSSARG00000003073 I 0.816
ENSMPUG00000003670 Mustela putorius furo ENSMPUG00000003670 I 0.816
ZNF18 Dasypus novemcinctus ENSDNOG00000036895 I 0.816
ENSP00000391376 Macaca fascicularis ENSP00000391376 I 0.815
ENSPANG00000023768 Papio anubis ENSPANG00000023768 I 0.815
ENSCSAG00000009126 Chlorocebus sabaeus ENSCSAG00000009126 I 0.815
Zfp18 Rattus norvegicus ENSRNOG00000003981 I 0.814
Zkscan6 Mus musculus ENSMUSG00000018347 I 0.811
ZNF18 Felis catus ENSFCAG00000027934 I 0.798
Myotis_brandtii_ZNF18_10012803 Myotis brandtii Myotis_brandtii_ZNF18_10012803 N 0.759