GLI1 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000007324 T089352_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gli1
M01023_2.00
Mus musculus
NGACCACCHN

NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.827 1.000
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.827 1.000
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV

BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.827 1.000
GLI1
M10176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.827 1.000
GLI1
M10177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.827 1.000
GLI1
M10178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.827 1.000
GLI1
M10179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.827 1.000
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG

CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.796 0.886
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK

MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.796 0.886
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV

BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.796 0.886
GLI3
M10167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.796 0.886
GLI3
M10168_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.796 0.886
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY

RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.796 0.886
Gli2
M01024_2.00
Mus musculus
NGACCACCYN

NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.779 0.851
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB

VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.779 0.851
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR

YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.779 0.851
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN

NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.779 0.851
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG

CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.779 0.851
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG

CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.779 0.851
GLI2
M10114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.779 0.851
GLI2
M10115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.779 0.851
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG

CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013656 C2H2 ZF 108 132
ENSCJAP00000013656 C2H2 ZF 140 167
ENSCJAP00000013656 C2H2 ZF 173 197
ENSCJAP00000013656 C2H2 ZF 203 228
ENSCJAP00000013656 C2H2 ZF 234 259
ENSCJAP00000013686 C2H2 ZF 236 260
ENSCJAP00000013686 C2H2 ZF 268 295
ENSCJAP00000013686 C2H2 ZF 301 325
ENSCJAP00000013686 C2H2 ZF 331 356
ENSCJAP00000013686 C2H2 ZF 362 387
ENSCJAP00000024516 C2H2 ZF 108 132
ENSCJAP00000024516 C2H2 ZF 140 167
ENSCJAP00000024516 C2H2 ZF 173 197
ENSCJAP00000024516 C2H2 ZF 203 228
ENSCJAP00000024516 C2H2 ZF 234 259
ENSCJAP00000046605 C2H2 ZF 195 219
ENSCJAP00000046605 C2H2 ZF 227 254
ENSCJAP00000046605 C2H2 ZF 260 284
ENSCJAP00000046605 C2H2 ZF 290 315
ENSCJAP00000046605 C2H2 ZF 321 346

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPAI002384 Phlebotomus papatasi PPAI002384 N 0.000
ADIR001353 Anopheles dirus ADIR001353 N 0.000
ACUA022967 Anopheles culicifacies ACUA022967 N 0.000
ACUA017562 Anopheles culicifacies ACUA017562 N 0.000
ACOM025760 Anopheles coluzzii ACOM025760 N 0.000
ACHR003814 Anopheles christyi ACHR003814 N 0.000
ACHR000830 Anopheles christyi ACHR000830 N 0.000
AATE004417 Anopheles atroparvus AATE004417 N 0.000
AARA008085 Anopheles arabiensis AARA008085 N 0.000
AARA002613 Anopheles arabiensis AARA002613 N 0.000
AALB008022 Anopheles albimanus AALB008022 N 0.000
LDEC018353 Leptinotarsa decemlineata LDEC018353 N 0.000
LCUP013707 Lucilia cuprina LCUP013707 N 0.000
HHAL006636-PA Halyomorpha halys HHAL006636-PA N 0.000
Hsal_05746--XP_396371.3_APIME Harpegnathos saltator Hsal_05746--XP_396371.3_APIME N 0.000
Cflo_02113--XP_396371.3_APIME Camponotus floridanus Cflo_02113--XP_396371.3_APIME N 0.000
ADIR007200 Anopheles dirus ADIR007200 N 0.000
AEPI005949 Anopheles epiroticus AEPI005949 N 0.000
AEPI009152 Anopheles epiroticus AEPI009152 N 0.000
MDOA002006 Musca domestica MDOA002006 N 0.000
ASTEI08810 Anopheles stephensi ASTEI08810 N 0.000
ASIS017447 Anopheles sinensis ASIS017447 N 0.000
AQUA007272 Anopheles quadriannulatus AQUA007272 N 0.000
AQUA004406 Anopheles quadriannulatus AQUA004406 N 0.000
AMIN010411 Anopheles minimus AMIN010411 N 0.000
AMIN005487 Anopheles minimus AMIN005487 N 0.000
AMEM008561 Anopheles merus AMEM008561 N 0.000
AMEC017669 Anopheles melas AMEC017669 N 0.000
AMEC000435 Anopheles melas AMEC000435 N 0.000
AMAM019785 Anopheles maculatus AMAM019785 N 0.000
AFUN003868 Anopheles funestus AFUN003868 N 0.000
AFUN001038 Anopheles funestus AFUN001038 N 0.000
AFAF018377 Anopheles farauti AFAF018377 N 0.000
AFAF013567 Anopheles farauti AFAF013567 N 0.000
YQE_07182 Dendroctonus ponderosae YQE_07182 N 0.000
TC014666 Tribolium castaneum TC014666 N 0.000
GI15474 Drosophila mojavensis FBgn0138223 N 0.000
GI14331 Drosophila mojavensis FBgn0137084 N 0.000
GH11849 Drosophila grimshawi FBgn0119328 N 0.000
GH10255 Drosophila grimshawi FBgn0117736 N 0.000
GG18249 Drosophila erecta FBgn0110465 N 0.000
GF21727 Drosophila ananassae FBgn0098727 N 0.000
GA14764 Drosophila pseudoobscura FBgn0074791 N 0.000
DAPPUDRAFT_304868 Daphnia pulex DAPPUDRAFT_304868 N 0.000
CPIJ003789 Culex quinquefasciatus CPIJ003789 N 0.000
BGIBMGA003121 Bombyx mori BGIBMGA003121 N 0.000
AGAP007517 Anopheles gambiae AGAP007517 N 0.000
AGAP000336 Anopheles gambiae AGAP000336 N 0.000
ADAC005282 Anopheles darlingi ADAC005282 N 0.000
ACEP26919 Atta cephalotes ACEP26919 N 0.000
AAEL013653 Aedes aegypti AAEL013653 N 0.000
GL16412 Drosophila persimilis FBgn0154016 N 0.000
GM21561 Drosophila sechellia FBgn0176441 N 0.000
GJ17285 Drosophila virilis FBgn0204460 N 0.000
SMAR014284 Strigamia maritima SMAR014284 N 0.000
SINV24562 Solenopsis invicta SINV24562 N 0.000
RPRC008747 Rhodnius prolixus RPRC008747 N 0.000
PHUM375280 Pediculus humanus PHUM375280 N 0.000
NV17354 Nasonia vitripennis NV17354 N 0.000
MCINX007554 Melitaea cinxia MCINX007554 N 0.000
L798_06110 Zootermopsis nevadensis L798_06110 N 0.000
KGM_18877 Danaus plexippus KGM_18877 N 0.000
ISCW018321 Ixodes scapularis ISCW018321 N 0.000
HMEL012402 Heliconius melpomene HMEL012402 N 0.000
GB45421 Apis mellifera GB45421 N 0.000
Trf2 Drosophila melanogaster FBgn0261793 N 0.000
GE15780 Drosophila yakuba FBgn0233345 N 0.000
GK16294 Drosophila willistoni FBgn0218296 N 0.000
GJ19385 Drosophila virilis FBgn0206528 N 0.000
CpipJ_CPIJ003789 Culex pipiens CpipJ_CPIJ003789 N 0.000