GLI1 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000007324 T089352_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gli1
M01023_2.00
Mus musculus
NGACCACCHN

NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.827 1.000
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.827 1.000
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV

BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.827 1.000
GLI1
M10176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.827 1.000
GLI1
M10177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.827 1.000
GLI1
M10178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.827 1.000
GLI1
M10179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.827 1.000
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG

CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.796 0.886
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK

MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.796 0.886
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV

BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.796 0.886
GLI3
M10167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.796 0.886
GLI3
M10168_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.796 0.886
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY

RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.796 0.886
Gli2
M01024_2.00
Mus musculus
NGACCACCYN

NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.779 0.851
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB

VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.779 0.851
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR

YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.779 0.851
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN

NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.779 0.851
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG

CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.779 0.851
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG

CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.779 0.851
GLI2
M10114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.779 0.851
GLI2
M10115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.779 0.851
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG

CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013656 C2H2 ZF 108 132
ENSCJAP00000013656 C2H2 ZF 140 167
ENSCJAP00000013656 C2H2 ZF 173 197
ENSCJAP00000013656 C2H2 ZF 203 228
ENSCJAP00000013656 C2H2 ZF 234 259
ENSCJAP00000013686 C2H2 ZF 236 260
ENSCJAP00000013686 C2H2 ZF 268 295
ENSCJAP00000013686 C2H2 ZF 301 325
ENSCJAP00000013686 C2H2 ZF 331 356
ENSCJAP00000013686 C2H2 ZF 362 387
ENSCJAP00000024516 C2H2 ZF 108 132
ENSCJAP00000024516 C2H2 ZF 140 167
ENSCJAP00000024516 C2H2 ZF 173 197
ENSCJAP00000024516 C2H2 ZF 203 228
ENSCJAP00000024516 C2H2 ZF 234 259
ENSCJAP00000046605 C2H2 ZF 195 219
ENSCJAP00000046605 C2H2 ZF 227 254
ENSCJAP00000046605 C2H2 ZF 260 284
ENSCJAP00000046605 C2H2 ZF 290 315
ENSCJAP00000046605 C2H2 ZF 321 346

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R002718 Calypte anna Aan_R002718 I 0.000
Afo_R000376 Aptenodytes forsteri Afo_R000376 I 0.000
Alligator_sinensis_CCG007030.1 Alligator sinensis Alligator_sinensis_CCG007030.1 I 0.000
Alligator_sinensis_CCG016908.1 Alligator sinensis Alligator_sinensis_CCG016908.1 I 0.000
ATF6 Homo sapiens ENSG00000118217 D 0.000
ATF6 Taeniopygia guttata ENSTGUG00000017057 I 0.000
atf6 Takifugu rubripes ENSTRUG00000006660 I 0.000
ATF6 Gorilla gorilla ENSGGOG00000013807 I 0.000
ATF6 Tursiops truncatus ENSTTRG00000008508 I 0.000
ATF6 Tupaia belangeri ENSTBEG00000015845 I 0.000
ATF6 Felis catus ENSFCAG00000023651 I 0.000
atf6 Gasterosteus aculeatus ENSGACG00000011702 I 0.000
ATF6 Loxodonta africana ENSLAFG00000003622 I 0.000
ATF6 Sus scrofa ENSSSCG00000006346 I 0.000
ATF6 Otolemur garnettii ENSOGAG00000001917 I 0.000
ATF6 Oryctolagus cuniculus ENSOCUG00000007930 I 0.000
ATF6 Pan troglodytes ENSPTRG00000001596 I 0.000
Atf6 Mus musculus ENSMUSG00000026663 I 0.000
Atf6 Rattus norvegicus ENSRNOG00000024632 I 0.000
ATF6 Monodelphis domestica ENSMODG00000000980 I 0.000
ATF6 Macaca mulatta ENSMMUG00000004049 I 0.000
ATF6 Microcebus murinus ENSMICG00000000038 I 0.000
ATF6 Meleagris gallopavo ENSMGAG00000005185 I 0.000
ATF6 Echinops telfairi ENSETEG00000004183 I 0.000
ATF6 Erinaceus europaeus ENSEEUG00000000007 I 0.000
ATF6 Equus caballus ENSECAG00000022307 I 0.000
ATF6 Bos taurus ENSBTAG00000005227 I 0.000
ATF6 Canis familiaris ENSCAFG00000013068 I 0.000
ATF6 Choloepus hoffmanni ENSCHOG00000009031 I 0.000
ATF6 Callithrix jacchus ENSCJAG00000004572 I 0.000
ATF6 Ornithorhynchus anatinus ENSOANG00000009735 I 0.000
ATF6 Cavia porcellus ENSCPOG00000010325 I 0.000
atf6 Oryzias latipes ENSORLG00000016676 I 0.000
atf6 Xenopus tropicalis XB-GENE-983814 I 0.000
ATF6 Anolis carolinensis ENSACAG00000001336 I 0.000
atf6 Danio rerio ENSDARG00000012656 I 0.000
ATF6 Vicugna pacos ENSVPAG00000004732 I 0.000
atf6.S Xenopus laevis XB-GENE-983817 I 0.000
ATF6B Sus scrofa ENSSSCG00000001430 I 0.000
ATF6B Ochotona princeps ENSOPRG00000019053 I 0.000
Atf6b Mus musculus ENSMUSG00000015461 I 0.000
ATF6B Procavia capensis ENSPCAG00000009251 I 0.000
ATF6B Otolemur garnettii ENSOGAG00000032721 I 0.000
ATF6B Anolis carolinensis ENSACAG00000010535 I 0.000
Atf6b Rattus norvegicus ENSRNOG00000000431 I 0.000
ATF6B Pteropus vampyrus ENSPVAG00000005144 I 0.000
ATF6B Oryctolagus cuniculus ENSOCUG00000023089 I 0.000
ATF6B Bos taurus ENSBTAG00000008794 I 0.000
ATF6B Monodelphis domestica ENSMODG00000014920 I 0.000
ATF6B Macaca mulatta ENSMMUG00000015229 I 0.000
ATF6B Equus caballus ENSECAG00000021507 I 0.000
ATF6B Felis catus ENSFCAG00000018408 I 0.000
Atf6b Dipodomys ordii ENSDORG00000004227 I 0.000
ATF6B Dasypus novemcinctus ENSDNOG00000042135 I 0.000
ATF6B Homo sapiens ENSG00000213676 D 0.000
ATF6B Gorilla gorilla ENSGGOG00000004870 I 0.000
ATF6B Callithrix jacchus ENSCJAG00000036009 I 0.000
ATF6B Cavia porcellus ENSCPOG00000023551 I 0.000
ATF6B Loxodonta africana ENSLAFG00000020739 I 0.000
ATF6B Tursiops truncatus ENSTTRG00000005958 I 0.000
ATF6B Myotis lucifugus ENSMLUG00000026641 I 0.000
ATF6B Canis familiaris ENSCAFG00000000761 I 0.000
ATF6B Pan troglodytes ENSPTRG00000034357 I 0.000
Brh_R005562 Buceros rhinoceros Brh_R005562 I 0.000
CapteG216503 Capitella teleta CapteG216503 I 0.000
ENSAMEG00000001631 Ailuropoda melanoleuca ENSAMEG00000001631 I 0.000
ENSAMEG00000002381 Ailuropoda melanoleuca ENSAMEG00000002381 I 0.000
ENSAMXG00000010343 Astyanax mexicanus ENSAMXG00000010343 I 0.000
ENSAPLG00000013950 Anas platyrhynchos ENSAPLG00000013950 I 0.000
ENSBTAP00000042742-D1 Bos grunniens ENSBTAP00000042742-D1 I 0.000
ENSCSAG00000002721 Chlorocebus sabaeus ENSCSAG00000002721 I 0.000
ENSCSAG00000009237 Chlorocebus sabaeus ENSCSAG00000009237 I 0.000
ENSDNOG00000008226 Dasypus novemcinctus ENSDNOG00000008226 I 0.000
ENSFALG00000003490 Ficedula albicollis ENSFALG00000003490 I 0.000
ENSGALG00000002658 Gallus gallus ENSGALG00000002658 I 0.000
ENSGMOG00000018033 Gadus morhua ENSGMOG00000018033 I 0.000
ENSLACG00000007649 Latimeria chalumnae ENSLACG00000007649 I 0.000
ENSLACG00000012831 Latimeria chalumnae ENSLACG00000012831 I 0.000
ENSLOCG00000001278 Lepisosteus oculatus ENSLOCG00000001278 I 0.000
ENSMEUG00000008122 Macropus eugenii ENSMEUG00000008122 I 0.000
ENSMPUG00000003493 Mustela putorius furo ENSMPUG00000003493 I 0.000
ENSMPUG00000010305 Mustela putorius furo ENSMPUG00000010305 I 0.000
ENSNLEG00000006562 Nomascus leucogenys ENSNLEG00000006562 I 0.000
ENSNLEG00000014528 Nomascus leucogenys ENSNLEG00000014528 I 0.000
ENSOARG00000010418 Ovis aries ENSOARG00000010418 I 0.000
ENSONIG00000002137 Oreochromis niloticus ENSONIG00000002137 I 0.000
ENSP00000356919 Macaca fascicularis ENSP00000356919 I 0.000
ENSP00000356919-D1 Bos grunniens ENSP00000356919-D1 I 0.000
ENSP00000364349 Macaca fascicularis ENSP00000364349 I 0.000
ENSPANG00000006897 Papio anubis ENSPANG00000006897 I 0.000
ENSPANG00000021910 Papio anubis ENSPANG00000021910 I 0.000
ENSPFOG00000018418 Poecilia formosa ENSPFOG00000018418 I 0.000
ENSPMAG00000007037 Petromyzon marinus ENSPMAG00000007037 I 0.000
ENSPPYG00000016479 Pongo abelii ENSPPYG00000016479 I 0.000
ENSPSIG00000016522 Pelodiscus sinensis ENSPSIG00000016522 I 0.000
ENSSHAG00000005867 Sarcophilus harrisii ENSSHAG00000005867 I 0.000
ENSSHAG00000010010 Sarcophilus harrisii ENSSHAG00000010010 I 0.000
ENSSTOG00000027684 Ictidomys tridecemlineatus ENSSTOG00000027684 I 0.000
ENSTSYG00000002035 Tarsius syrichta ENSTSYG00000002035 I 0.000
ENSTSYG00000003325 Tarsius syrichta ENSTSYG00000003325 I 0.000
ENSXMAG00000013231 Xiphophorus maculatus ENSXMAG00000013231 I 0.000
Gfo_R012350 Geospiza fortis Gfo_R012350 I 0.000
L798_08597 Zootermopsis nevadensis L798_08597 I 0.000
Myotis_brandtii_ATF6B_10007217 Myotis brandtii Myotis_brandtii_ATF6B_10007217 I 0.000
Myotis_brandtii_ATF6_10024274 Myotis brandtii Myotis_brandtii_ATF6_10024274 I 0.000
Ogr01669 Ophisaurus gracilis Ogr01669 I 0.000
Ogr11447 Ophisaurus gracilis Ogr11447 I 0.000
Pvit_13420 Pogona vitticeps Pvit_13420 I 0.000
Pvit_17701 Pogona vitticeps Pvit_17701 I 0.000
SMAR005991 Strigamia maritima SMAR005991 I 0.000
Tal_R013420 Tyto alba Tal_R013420 I 0.000