CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF558
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000011049
T089426_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.825
0.985
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000020400
C2H2 ZF
182
203
ECNQCFKVFSTKSNLTQHKRIH
ENSCJAP00000020400
C2H2 ZF
209
231
YDCNQCGKSFSSRSYLTIHKRIH
ENSCJAP00000020400
C2H2 ZF
237
259
YECNHCGKAFSDPSSLRLHVRIH
ENSCJAP00000020400
C2H2 ZF
265
287
YECNQCFHVFRTSCNLKSHKRIH
ENSCJAP00000020400
C2H2 ZF
293
315
HECNQCGKAFSTRSSLTGHNSIH
ENSCJAP00000020400
C2H2 ZF
321
343
YECHDCGKTFRKSSYLTQHVRTH
ENSCJAP00000020400
C2H2 ZF
349
371
YECNECGKSFSSSFSLTVHKRIH
ENSCJAP00000020400
C2H2 ZF
377
399
YECNDCGKAFNNLSAVKKHLRTH
ENSCJAP00000020400
C2H2 ZF
405
427
YECNHCGKSFTSNSYLSVHKRIH
ENSCJAP00000020415
C2H2 ZF
155
176
ECNQCFKVFSTKSNLTQHKRIH
ENSCJAP00000020415
C2H2 ZF
182
204
YDCNQCGKSFSSRSYLTIHKRIH
ENSCJAP00000020415
C2H2 ZF
210
232
YECNHCGKAFSDPSSLRLHVRIH
ENSCJAP00000020415
C2H2 ZF
238
260
YECNQCFHVFRTSCNLKSHKRIH
ENSCJAP00000020415
C2H2 ZF
266
288
HECNQCGKAFSTRSSLTGHNSIH
ENSCJAP00000020415
C2H2 ZF
294
316
YECHDCGKTFRKSSYLTQHVRTH
ENSCJAP00000020415
C2H2 ZF
322
344
YECNECGKSFSSSFSLTVHKRIH
ENSCJAP00000020415
C2H2 ZF
350
372
YECNDCGKAFNNLSAVKKHLRTH
ENSCJAP00000020415
C2H2 ZF
378
400
YECNHCGKSFTSNSYLSVHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy