ZNF558 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000011049 T089426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK

MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.825 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000020400 C2H2 ZF 182 203
ENSCJAP00000020400 C2H2 ZF 209 231
ENSCJAP00000020400 C2H2 ZF 237 259
ENSCJAP00000020400 C2H2 ZF 265 287
ENSCJAP00000020400 C2H2 ZF 293 315
ENSCJAP00000020400 C2H2 ZF 321 343
ENSCJAP00000020400 C2H2 ZF 349 371
ENSCJAP00000020400 C2H2 ZF 377 399
ENSCJAP00000020400 C2H2 ZF 405 427
ENSCJAP00000020415 C2H2 ZF 155 176
ENSCJAP00000020415 C2H2 ZF 182 204
ENSCJAP00000020415 C2H2 ZF 210 232
ENSCJAP00000020415 C2H2 ZF 238 260
ENSCJAP00000020415 C2H2 ZF 266 288
ENSCJAP00000020415 C2H2 ZF 294 316
ENSCJAP00000020415 C2H2 ZF 322 344
ENSCJAP00000020415 C2H2 ZF 350 372
ENSCJAP00000020415 C2H2 ZF 378 400

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

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25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action