CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF143
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000011327
T089433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.827
1.000
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.827
1.000
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.827
1.000
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.827
1.000
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.827
1.000
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.827
1.000
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.827
1.000
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.826
0.981
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.765
0.845
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.765
0.845
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.765
0.845
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.765
0.845
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000020918
C2H2 ZF
206
230
FRCEYDGCGKLYTTAHHLKVHERSH
ENSCJAP00000020918
C2H2 ZF
236
260
YQCEHAGCGKAFATGYGLKSHVRTH
ENSCJAP00000020918
C2H2 ZF
266
290
YRCSEDNCTKSFKTSGDLQKHIRTH
ENSCJAP00000020918
C2H2 ZF
296
320
FKCPFEGCGRSFTTSNIRKVHVRTH
ENSCJAP00000020918
C2H2 ZF
326
350
YYCTEPGCGRAFASATNYKNHVRIH
ENSCJAP00000020918
C2H2 ZF
356
380
YVCTVPGCDKRFTEYSSLYKHHVVH
ENSCJAP00000020918
C2H2 ZF
386
409
YNCNHCGKTYKQISTLAMHKRTAH
ENSCJAP00000020928
C2H2 ZF
237
261
FRCEYDGCGKLYTTAHHLKVHERSH
ENSCJAP00000020928
C2H2 ZF
267
291
YQCEHAGCGKAFATGYGLKSHVRTH
ENSCJAP00000020928
C2H2 ZF
297
321
YRCSEDNCTKSFKTSGDLQKHIRTH
ENSCJAP00000020928
C2H2 ZF
327
351
FKCPFEGCGRSFTTSNIRKVHVRTH
ENSCJAP00000020928
C2H2 ZF
357
381
YYCTEPGCGRAFASATNYKNHVRIH
ENSCJAP00000020928
C2H2 ZF
387
411
YVCTVPGCDKRFTEYSSLYKHHVVH
ENSCJAP00000020928
C2H2 ZF
417
440
YNCNHCGKTYKQISTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy