CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF84
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000013094
T089473_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF84
M07736_2.00
Homo sapiens
YTKCCTGTTCHYNBNNBYYBY
RVRRVNNVNRDGAACAGGMAR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF84.RCADE.ReprocessedData
0.816
0.968
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000024053
C2H2 ZF
207
229
YECSECRKRFTKKPSLIKHQSRH
ENSCJAP00000024053
C2H2 ZF
235
257
FGCGKCGKTFPQKSQFVTHHRTH
ENSCJAP00000024053
C2H2 ZF
263
285
YNCSQCGKAFSQKSQLTSHQRTH
ENSCJAP00000024053
C2H2 ZF
291
313
YECGECGKAFSRKSHLISHWRTH
ENSCJAP00000024053
C2H2 ZF
319
341
YGCNECGRAFSEKSNLINHQRIH
ENSCJAP00000024053
C2H2 ZF
347
369
FECRECGKAFSRKSQLVTHHRTH
ENSCJAP00000024053
C2H2 ZF
375
397
FGCSDCRKAFFEKSELVRHQTIH
ENSCJAP00000024053
C2H2 ZF
403
425
YECSECQKAFRERSSLINHQRTH
ENSCJAP00000024053
C2H2 ZF
433
453
CLQCGKAFSQKSHLISHQMTH
ENSCJAP00000024053
C2H2 ZF
459
481
FICGKCGKAFSRKSQLVRHQRTH
ENSCJAP00000024053
C2H2 ZF
487
509
YECSECGKAFSEKLSLTNHQRIH
ENSCJAP00000024053
C2H2 ZF
515
537
YVCTECGKAFCQKSHLISHQRTH
ENSCJAP00000024053
C2H2 ZF
543
565
YECTECGKAFGEKSSLATHQRTH
ENSCJAP00000024053
C2H2 ZF
571
593
YECRDCEKAFSQKSQLNTHQRIH
ENSCJAP00000024053
C2H2 ZF
599
621
YECSLCRKAFFEKSELIRHLRTH
ENSCJAP00000024053
C2H2 ZF
627
649
YECNECRKAFREKSSLINHQRIH
ENSCJAP00000024053
C2H2 ZF
655
677
FECNECGKAFSRKSHLIPHQRTH
ENSCJAP00000024053
C2H2 ZF
683
705
YGCSECRKAFSQKSQLVNHQRIH
ENSCJAP00000024053
C2H2 ZF
711
733
YQCSACGKAFSQKSQLINHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy