ZNF140 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000013104 T089474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN

NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.819 0.974
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB

VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.819 0.974
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN

NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.819 0.974
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV

BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.819 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000024056 C2H2 ZF 161 183
ENSCJAP00000024056 C2H2 ZF 189 211
ENSCJAP00000024056 C2H2 ZF 217 239
ENSCJAP00000024056 C2H2 ZF 245 267
ENSCJAP00000024056 C2H2 ZF 273 295
ENSCJAP00000024056 C2H2 ZF 301 323
ENSCJAP00000024056 C2H2 ZF 329 351
ENSCJAP00000024056 C2H2 ZF 357 379
ENSCJAP00000024056 C2H2 ZF 385 407
ENSCJAP00000024056 C2H2 ZF 413 435
ENSCJAP00000024069 C2H2 ZF 58 80
ENSCJAP00000024069 C2H2 ZF 86 108
ENSCJAP00000024069 C2H2 ZF 114 136
ENSCJAP00000024069 C2H2 ZF 142 164
ENSCJAP00000024069 C2H2 ZF 170 192
ENSCJAP00000024069 C2H2 ZF 198 220
ENSCJAP00000024069 C2H2 ZF 226 248
ENSCJAP00000024069 C2H2 ZF 254 276
ENSCJAP00000024069 C2H2 ZF 282 304
ENSCJAP00000024069 C2H2 ZF 310 332

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

Invalid Input OrderBy

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action