SNAI2 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000013499 T089497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SNAI2
M00221_2.00
Homo sapiens
HACYTGH

DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.827 1.000
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN

NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.827 1.000
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY

RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.827 1.000
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY

RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.827 1.000
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY

RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.827 1.000
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY

RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.827 1.000
SNAI2
M10102_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.827 1.000
SNAI2
M10103_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.827 1.000
SNAI2
M10104_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.827 1.000
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY

RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.827 1.000
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.827 1.000
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.827 1.000
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN

NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.823 0.991
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000024825 C2H2 ZF 128 150
ENSCJAP00000024825 C2H2 ZF 159 181
ENSCJAP00000024825 C2H2 ZF 185 207
ENSCJAP00000024825 C2H2 ZF 213 235
ENSCJAP00000024825 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CADANGAG00002230 Aspergillus niger CADANGAG00002230 N 0.000
BBA_01545 Beauveria bassiana BBA_01545 N 0.000
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N 0.000
CTHT_0020070 Chaetomium thermophilum CTHT_0020070 N 0.000
CPUR_00596 Claviceps purpurea CPUR_00596 N 0.000
CGGC5_3996 Colletotrichum gloeosporioides CGGC5_3996 N 0.000
GLRG_10810 Colletotrichum graminicola GLRG_10810 N 0.000
CH063_07308 Colletotrichum higginsianum CH063_07308 N 0.000
Cob_01816 Colletotrichum orbiculare Cob_01816 N 0.000
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N 0.000
CCM_00998 Cordyceps militaris CCM_00998 N 0.000
EPUS_07916 Endocarpon pusillum EPUS_07916 N 0.000
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N 0.000
FGRRES_06071 Fusarium graminearum FGRRES_06071 N 0.000
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N 0.000
NechaG60026 Fusarium solani NechaG60026 N 0.000
FVEG_04708 Fusarium verticillioides FVEG_04708 N 0.000
MPH_12253 Macrophomina phaseolina MPH_12253 N 0.000
MAC_09480 Metarhizium acridum MAC_09480 N 0.000
MAM_04763 Metarhizium album MAM_04763 N 0.000
MANI_012588 Metarhizium anisopliae MANI_012588 N 0.000
MBR_03064 Metarhizium brunneum MBR_03064 N 0.000
MGU_04765 Metarhizium guizhouense MGU_04765 N 0.000
MAJ_05808 Metarhizium majus MAJ_05808 N 0.000
X797_001129 Metarhizium robertsii X797_001129 N 0.000
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N 0.000
NCAS_0C02550 Naumovozyma castellii NCAS_0C02550 N 0.000
estExt_Genewise1.C_sca_3_chr4_2_00632 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00632 N 0.000
NCU05891 Neurospora crassa NCU05891 N 0.000
estExt_Genewise1.C_90051 Neurospora discreta estExt_Genewise1.C_90051 N 0.000
NEUTE1DRAFT_86802 Neurospora tetrasperma NEUTE1DRAFT_86802 N 0.000
OIDMADRAFT_162843 Oidiodendron maius OIDMADRAFT_162843 N 0.000
OCS_06782 Ophiocordyceps sinensis OCS_06782 N 0.000
Scas_Contig562.2 Saccharomyces castellii Scas_Contig562.2 N 0.000
SMAC_08547 Sordaria macrospora SMAC_08547 N 0.000
S40288_01911 Stachybotrys chartarum S40288_01911 N 0.000
S40285_02142 Stachybotrys chlorohalonata S40285_02142 N 0.000
THITE_2067650 Thielavia terrestris THITE_2067650 N 0.000
UCRPA7_6046 Togninia minima UCRPA7_6046 N 0.000
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N 0.000
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N 0.000
TRIVIDRAFT_36951 Trichoderma virens TRIVIDRAFT_36951 N 0.000
UREG_07450 Uncinocarpus reesii UREG_07450 N 0.000
UV8b_5421 Ustilaginoidea virens UV8b_5421 N 0.000
VDBG_03434 Verticillium albo atrum VDBG_03434 N 0.000
VDBG_03434 Verticillium alfalfae VDBG_03434 N 0.000
VDAG_09953 Verticillium dahliae VDAG_09953 N 0.000