CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF449
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000014517
T089519_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF449
M04560_2.00
Homo sapiens
NTGYTKGCWCGCGAB
VTCGCGWGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1
0.827
1.000
ZNF449
M04561_2.00
Homo sapiens
RCGCCCAACC
GGTTGGGCGY
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2
0.827
1.000
ZNF449
M08344_2.00
Homo sapiens
NNVAGCCCARCCHNNNNNNNN
NNNNNNNNDGGYTGGGCTBNN
ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE
0.827
1.000
ZNF449
M08922_2.00
Homo sapiens
VAGCCCARCCN
NGGYTGGGCTB
Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C
0.827
1.000
ZNF449
M04562_2.00
Homo sapiens
MMGCCCMACC
GGTKGGGCKK
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1
0.827
1.000
ZNF449
M04563_2.00
Homo sapiens
NTGYTKGCDCGCGWB
VWCGCGHGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000026724
C2H2 ZF
323
345
HRCPQCGKCFARKSQLTGHQRIH
ENSCJAP00000026724
C2H2 ZF
351
373
HKCPECGKRFLRSSDLYRHQRLH
ENSCJAP00000026724
C2H2 ZF
379
401
YECTVCKKRFTRRSHLIGHQRTH
ENSCJAP00000026724
C2H2 ZF
407
429
YKCLECGKSFCHGSSLKRHLKTH
ENSCJAP00000026724
C2H2 ZF
435
457
HRCHNCGKSFSRLTALTLHQRTH
ENSCJAP00000026724
C2H2 ZF
463
485
FKCNYCGKSFRQRPSLVIHLRIH
ENSCJAP00000026724
C2H2 ZF
491
513
YKCTHCSKSFRQRAGLIMHQVTH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy