ZSCAN9 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000018658 T089613_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN9
M04465_2.00 		Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX 		0.818 0.939
ZSCAN9
M04466_2.00 		Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX 		0.818 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000034672 C2H2 ZF 256 278
ENSCJAP00000034672 C2H2 ZF 284 306
ENSCJAP00000034672 C2H2 ZF 312 334
ENSCJAP00000034672 C2H2 ZF 340 362
ENSCJAP00000034672 C2H2 ZF 368 390

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

Invalid Input OrderBy

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action