ZNF354B (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000018848 T089622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT

AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.819 0.987
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY

RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.772 0.923
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC

GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.772 0.923
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW

WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.772 0.923
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000035010 C2H2 ZF 214 236
ENSCJAP00000035010 C2H2 ZF 242 264
ENSCJAP00000035010 C2H2 ZF 270 292
ENSCJAP00000035010 C2H2 ZF 298 320
ENSCJAP00000035010 C2H2 ZF 354 376
ENSCJAP00000035010 C2H2 ZF 382 404
ENSCJAP00000035010 C2H2 ZF 410 432
ENSCJAP00000035010 C2H2 ZF 438 460
ENSCJAP00000035010 C2H2 ZF 466 488
ENSCJAP00000035010 C2H2 ZF 494 516
ENSCJAP00000035010 C2H2 ZF 522 544
ENSCJAP00000035010 C2H2 ZF 550 572
ENSCJAP00000035010 C2H2 ZF 578 600

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TFAP2A Homo sapiens ENSG00000137203 D 0.000
ACEP15405 Atta cephalotes ACEP15405 I 0.000
ECPE_0000534101 Echinostoma caproni ECPE_0000534101 I 0.000
genemark-nMf.1.1.scaf12791-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf12791-processed-gene-0.1 I 0.000
GPLIN_001548200 Globodera pallida GPLIN_001548200 I 0.000
Hba_07416 Heterorhabditis bacteriophora Hba_07416 I 0.000
MhA1_Contig1235.frz3.gene9 Meloidogyne hapla MhA1_Contig1235.frz3.gene9 I 0.000
nAv.1.0.1.g06665 Acanthocheilonema viteae nAv.1.0.1.g06665 I 0.000
OFLC_0000811001 Onchocerca flexuosa OFLC_0000811001 I 0.000
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I 0.000
D917_08051 Trichinella nativa D917_08051 I 0.000
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I 0.000
Sjc_0121700 Schistosoma japonicum Sjc_0121700 I 0.000
tfap2b Danio rerio ENSDARG00000012667 I 0.000
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I 0.000
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I 0.000
ENSMEUG00000007703 Macropus eugenii ENSMEUG00000007703 I 0.000
TFAP2D Microcebus murinus ENSMICG00000005507 I 0.000
MCINX002204 Melitaea cinxia MCINX002204 I 0.000
PPA19579 Pristionchus pacificus PPA19579 I 0.000
Sakowv30010957m.g Saccoglossus kowalevskii Sakowv30010957m.g I 0.000
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 I 0.000