ZNF250 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000021381 T089688_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.827 1.000
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.827 1.000
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.827 1.000
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.827 1.000
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000039787 C2H2 ZF 194 216
ENSCJAP00000039787 C2H2 ZF 222 244
ENSCJAP00000039787 C2H2 ZF 250 272
ENSCJAP00000039787 C2H2 ZF 278 300
ENSCJAP00000039787 C2H2 ZF 306 328
ENSCJAP00000039787 C2H2 ZF 334 356
ENSCJAP00000039787 C2H2 ZF 362 384
ENSCJAP00000039787 C2H2 ZF 390 412
ENSCJAP00000039787 C2H2 ZF 418 440
ENSCJAP00000039788 C2H2 ZF 176 198
ENSCJAP00000039788 C2H2 ZF 204 226
ENSCJAP00000039788 C2H2 ZF 232 254
ENSCJAP00000039788 C2H2 ZF 260 282
ENSCJAP00000039788 C2H2 ZF 288 310
ENSCJAP00000039788 C2H2 ZF 316 338
ENSCJAP00000039788 C2H2 ZF 344 366
ENSCJAP00000039788 C2H2 ZF 372 394
ENSCJAP00000039788 C2H2 ZF 400 422
ENSCJAP00000039788 C2H2 ZF 428 450
ENSCJAP00000039788 C2H2 ZF 456 478
ENSCJAP00000039788 C2H2 ZF 484 506
ENSCJAP00000039788 C2H2 ZF 512 534
ENSCJAP00000039789 C2H2 ZF 199 221
ENSCJAP00000039789 C2H2 ZF 227 249
ENSCJAP00000039789 C2H2 ZF 255 277
ENSCJAP00000039789 C2H2 ZF 283 305
ENSCJAP00000039789 C2H2 ZF 311 333
ENSCJAP00000039789 C2H2 ZF 339 361
ENSCJAP00000039789 C2H2 ZF 367 389
ENSCJAP00000039789 C2H2 ZF 395 417
ENSCJAP00000039789 C2H2 ZF 423 445
ENSCJAP00000039789 C2H2 ZF 451 473
ENSCJAP00000039789 C2H2 ZF 479 501
ENSCJAP00000039789 C2H2 ZF 507 529
ENSCJAP00000039789 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF250 Homo sapiens ENSG00000196150 D 0.827
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.827
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.827
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.826
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.826
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.826
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.826
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.826
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.826
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.818
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.816
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.816
Zfp647 Mus musculus ENSMUSG00000054967 I 0.816
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.816
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.815
Zfp647 Dipodomys ordii ENSDORG00000003353 I 0.815
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.805
ZNF250 Sorex araneus ENSSARG00000004999 I 0.804
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.801
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.801
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.800
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.799
ZNF250 Felis catus ENSFCAG00000013730 I 0.795
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.794
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.794
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.794
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.793
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.793
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.781
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.774
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.765