CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RBAK
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000021500
T089697_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.824
0.985
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000040029
C2H2 ZF
255
277
FECSQCGKSFCKKSKFIIHQRAH
ENSCJAP00000040029
C2H2 ZF
283
305
YECNVCGKSFSQKGTLTVHRRSH
ENSCJAP00000040029
C2H2 ZF
311
333
YKCNECGKTFCQKLHLTQHLRTH
ENSCJAP00000040029
C2H2 ZF
339
361
YECSECGKTFCQKTHLTLHQRNH
ENSCJAP00000040029
C2H2 ZF
367
389
YPCNECGKSFSRKSALSDHQRTH
ENSCJAP00000040029
C2H2 ZF
395
417
YKCNECGKSYYRKSTLITHQRTH
ENSCJAP00000040029
C2H2 ZF
423
445
YQCSECGKFFSRVSYLTIHYRSH
ENSCJAP00000040029
C2H2 ZF
451
473
YECNECGKTFNLNSAFIRHRKVH
ENSCJAP00000040029
C2H2 ZF
506
526
YECNECGKNFLVNSAFDGHQS
ENSCJAP00000040029
C2H2 ZF
534
556
YECNICGKLFSELSYYTEHYRSH
ENSCJAP00000040029
C2H2 ZF
562
584
YGCSECGKTFSHNSSLFRHQRVH
ENSCJAP00000040029
C2H2 ZF
590
612
YECYECGKFFSQKSYLTIHHRIH
ENSCJAP00000040029
C2H2 ZF
618
640
YECSKCGKVFSRMSNLTVHYRSH
ENSCJAP00000040029
C2H2 ZF
646
668
YECNECGKVFSQKSYLTVHYRTH
ENSCJAP00000040029
C2H2 ZF
674
696
YECNECGKKFHHRSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy