RBAK (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000021500 T089697_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN

NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000040029 C2H2 ZF 255 277
ENSCJAP00000040029 C2H2 ZF 283 305
ENSCJAP00000040029 C2H2 ZF 311 333
ENSCJAP00000040029 C2H2 ZF 339 361
ENSCJAP00000040029 C2H2 ZF 367 389
ENSCJAP00000040029 C2H2 ZF 395 417
ENSCJAP00000040029 C2H2 ZF 423 445
ENSCJAP00000040029 C2H2 ZF 451 473
ENSCJAP00000040029 C2H2 ZF 506 526
ENSCJAP00000040029 C2H2 ZF 534 556
ENSCJAP00000040029 C2H2 ZF 562 584
ENSCJAP00000040029 C2H2 ZF 590 612
ENSCJAP00000040029 C2H2 ZF 618 640
ENSCJAP00000040029 C2H2 ZF 646 668
ENSCJAP00000040029 C2H2 ZF 674 696

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

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20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action