CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000000009
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000000009
T089758_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ovol1
M08974_2.00
Mus musculus
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C
0.826
0.971
OVOL1
M04556_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX
0.820
0.971
OVOL1
M08919_2.00
Homo sapiens
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C
0.820
0.971
OVOL1
M04557_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX
0.820
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000000007
C2H2 ZF
93
115
FTCHICQKAFTYQRMLNRHMKCH
ENSCPOP00000000007
C2H2 ZF
121
143
HLCTYCGKGFNDTFDLKRHVRTH
ENSCPOP00000000007
C2H2 ZF
149
172
YKCSLCDKAFTQRCSLESHLKKIH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy