ENSCPOG00000001490 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000001490 T089782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.816 0.977
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.816 0.977
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.816 0.977
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.816 0.977
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.816 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000001346 C2H2 ZF 199 221
ENSCPOP00000001346 C2H2 ZF 227 249
ENSCPOP00000001346 C2H2 ZF 255 277
ENSCPOP00000001346 C2H2 ZF 283 305
ENSCPOP00000001346 C2H2 ZF 311 333
ENSCPOP00000001346 C2H2 ZF 339 361
ENSCPOP00000001346 C2H2 ZF 367 389
ENSCPOP00000001346 C2H2 ZF 395 417
ENSCPOP00000001346 C2H2 ZF 423 445
ENSCPOP00000001346 C2H2 ZF 451 473
ENSCPOP00000001346 C2H2 ZF 479 501
ENSCPOP00000001346 C2H2 ZF 507 529
ENSCPOP00000001346 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action