HINFP (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000006488 T089850_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HINFP
M02907_2.00 		Homo sapiens
BVRCGTCCGCNN
NNGCGGACGYBV		 SELEX
Jolma et al.(2013)
HINFP1_1 		0.763 0.970
HINFP
M02908_2.00 		Homo sapiens
GCGGACGYTRSRRCGTCCGC
GCGGACGYYSYARCGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_2 		0.763 0.970
HINFP
M02909_2.00 		Homo sapiens
GCGGACSBKSVRCGTCCGC
GCGGACGYBSMVSGTCCGC		 SELEX
Jolma et al.(2013)
HINFP1_3 		0.763 0.970
HINFP
M08918_2.00 		Homo sapiens
BWACGTCCGHBDNSNH
DNSNHVDCGGACGTWV		 Misc
Kulakovskiy et al.(2013)
HINFP_HUMAN.H11MO.0.C 		0.763 0.970
HINFP
M10262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIZF_01 		0.763 0.970
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000005843 C2H2 ZF 167 189
ENSCPOP00000005843 C2H2 ZF 196 216
ENSCPOP00000005843 C2H2 ZF 225 247
ENSCPOP00000005843 C2H2 ZF 251 274
ENSCPOP00000005843 C2H2 ZF 280 302
ENSCPOP00000005843 C2H2 ZF 341 364
ENSCPOP00000014498 C2H2 ZF 177 199
ENSCPOP00000014498 C2H2 ZF 206 226
ENSCPOP00000014498 C2H2 ZF 235 257
ENSCPOP00000014498 C2H2 ZF 261 284
ENSCPOP00000014498 C2H2 ZF 290 312
ENSCPOP00000014498 C2H2 ZF 351 374

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

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32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action