CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSCPOG00000008740
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000008740
T089882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAG1
M06465_2.00
Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG
B1H
Mathelier et al.(2014)
MA0163.1
0.826
0.994
PLAG1
M10286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_01
0.826
0.994
PLAG1
M10287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_02
0.826
0.994
PLAG1
M10288_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_08
0.826
0.994
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000007846
C2H2 ZF
41
63
FPCQLCDKAFNSVEKLKVHSYSH
ENSCPOP00000007846
C2H2 ZF
69
93
YKCTQQDCTKAFVSKYKLQRHMATH
ENSCPOP00000007846
C2H2 ZF
99
121
HKCNYCEKMFHRKDHLKNHLHTH
ENSCPOP00000007846
C2H2 ZF
128
150
FKCEECGKNYNTKLGFKRHLALH
ENSCPOP00000007846
C2H2 ZF
157
179
LTCKVCLQTFESTGVLLEHLKSH
ENSCPOP00000007846
C2H2 ZF
192
214
HQCEHCDRRFYTRKDVRRHMVVH
ENSCPOP00000007846
C2H2 ZF
220
243
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy