ZNF558 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000009453 T089897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF558
M07620_2.00 		Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData 		0.824 0.966
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000008486 C2H2 ZF 73 94
ENSCPOP00000008486 C2H2 ZF 100 122
ENSCPOP00000008486 C2H2 ZF 128 150
ENSCPOP00000008486 C2H2 ZF 156 178
ENSCPOP00000008486 C2H2 ZF 184 206
ENSCPOP00000008486 C2H2 ZF 212 234
ENSCPOP00000008486 C2H2 ZF 240 262
ENSCPOP00000008486 C2H2 ZF 268 290
ENSCPOP00000008486 C2H2 ZF 296 318

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action