CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000011396
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000011396
T089935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF436
M08305_2.00
Homo sapiens
TCCTCCAGGAAGCCY
RGGCTTCCTGGAGGA
ChIP-seq
Schmitges et al.(2016)
Q9C0F3_7-11.RCADE
0.826
0.996
ZNF436
M08887_2.00
Homo sapiens
CCTCCTCCAGGAAGCCYTCCHKGA
TCMDGGARGGCTTCCTGGAGGAGG
Misc
Kulakovskiy et al.(2013)
ZN436_HUMAN.H11MO.0.C
0.826
0.996
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000010243
C2H2 ZF
86
108
HICSHCGKAFSQISDLNRHQKTH
ENSCPOP00000010243
C2H2 ZF
114
136
YKCYECGKGFSRSSHLIQHQRTH
ENSCPOP00000010243
C2H2 ZF
142
164
YDCNECGKSFGRSSHLIQHQTIH
ENSCPOP00000010243
C2H2 ZF
170
192
HKCNECGKSFCRLSHLIQHQRTH
ENSCPOP00000010243
C2H2 ZF
198
220
YECDECGKSFSRSSHLAQHQRTH
ENSCPOP00000010243
C2H2 ZF
226
248
YECNECGRGFSERSDLIKHYRVH
ENSCPOP00000010243
C2H2 ZF
254
276
YKCDECGKNFSQNSDLVRHRRAH
ENSCPOP00000010243
C2H2 ZF
282
304
YHCNECGENFSRISHLVQHQRTH
ENSCPOP00000010243
C2H2 ZF
310
332
YECNACGKSFSRSSHLITHQKIH
ENSCPOP00000010243
C2H2 ZF
338
360
YECNECWRSFGERSDLIKHQRTH
ENSCPOP00000010243
C2H2 ZF
366
388
YECVQCGKGFTQSSNLITHQRVH
ENSCPOP00000010243
C2H2 ZF
394
416
YECTECEKSFSRSSALIKHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy