CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCPOG00000011739
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000011739
T089943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFX
M08850_2.00
Homo sapiens
YBVGGCCTVS
SBAGGCCBVR
Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A
0.809
0.993
ZFX
M10098_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFX_01
0.809
0.993
Zfx
M08100_2.00
Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV
ChIP-seq
Mathelier et al.(2014)
MA0146.2
0.804
0.987
Zfx
M09017_2.00
Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB
Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B
0.804
0.987
Zfx
M09517_2.00
Mus musculus
BNAGGCCT
AGGCCTNV
Misc
Heinz et al.(2010)
mES-Zfx_GSE11431
0.804
0.987
Zfx
M00788_2.00
Mus musculus
NRGGCCNNN
NNNGGCCYN
PBM
Weirauch et al.(2013)
pTH2933
0.803
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000010557
C2H2 ZF
420
442
YPCMICGKKFKSRGFLKRHMKNH
ENSCPOP00000010557
C2H2 ZF
451
473
YRCTDCDYTTNKKISLHNHLESH
ENSCPOP00000010557
C2H2 ZF
483
505
IECDECGKHFSHAGALFTHKMVH
ENSCPOP00000010557
C2H2 ZF
513
536
HKCKFCEYETAEQGLLNRHLLAVH
ENSCPOP00000010557
C2H2 ZF
542
564
HICVECGKGFRHPSELKKHMRIH
ENSCPOP00000010557
C2H2 ZF
570
593
YQCQYCEYRSADSSNLKTHVKTKH
ENSCPOP00000010557
C2H2 ZF
599
621
FKCDICFLTFSDTKEVQQHALIH
ENSCPOP00000010557
C2H2 ZF
627
650
HQCLHCDHKSSNSSDLKRHIISVH
ENSCPOP00000010557
C2H2 ZF
656
678
HKCDMCDKGFHRPSELKKHVAAH
ENSCPOP00000010557
C2H2 ZF
684
707
HQCRHCDFKIADPFVLSRHILSVH
ENSCPOP00000010557
C2H2 ZF
713
735
FRCKRCRKGFRQQNELKKHMKTH
ENSCPOP00000010557
C2H2 ZF
741
764
YQCEYCEYSTTDASGFKRHVISIH
ENSCPOP00000010557
C2H2 ZF
770
793
HRCEYCKKGFRRPSEKNQHIMRHH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy