ZNF189 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000015555 T089998_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN

NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.773 0.929
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB

VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.773 0.929
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA

TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.773 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000016177 C2H2 ZF 94 116
ENSCPOP00000016177 C2H2 ZF 122 144
ENSCPOP00000016177 C2H2 ZF 150 172
ENSCPOP00000016177 C2H2 ZF 178 200
ENSCPOP00000016177 C2H2 ZF 206 228
ENSCPOP00000016177 C2H2 ZF 234 256
ENSCPOP00000016177 C2H2 ZF 262 284
ENSCPOP00000016177 C2H2 ZF 290 312
ENSCPOP00000016177 C2H2 ZF 318 340
ENSCPOP00000016177 C2H2 ZF 346 368
ENSCPOP00000016177 C2H2 ZF 402 424
ENSCPOP00000016177 C2H2 ZF 430 452
ENSCPOP00000016177 C2H2 ZF 458 480
ENSCPOP00000016177 C2H2 ZF 486 508
ENSCPOP00000016177 C2H2 ZF 514 536

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action