CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF189
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000015555
T089998_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF189
M08311_2.00
Homo sapiens
VDGGAASRGMVDNDSNNN
NNNSHNHBKCYSTTCCHB
ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE
0.773
0.929
ZNF189
M07589_2.00
Homo sapiens
NBKCBSTTCCHB
VDGGAASVGMVN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData
0.773
0.929
ZNF189
M08244_2.00
Homo sapiens
TGGAAAA
TTTTCCA
ChIP-seq
Najafabadi et al.(2015b)
ZNF189
0.773
0.929
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000016177
C2H2 ZF
94
116
HKCEECGKGFVRKAHFIQHQRVH
ENSCPOP00000016177
C2H2 ZF
122
144
FQCNECGKSFSRSSFVIEHQRIH
ENSCPOP00000016177
C2H2 ZF
150
172
YECNYCGKTFSVSSTLIRHQRIH
ENSCPOP00000016177
C2H2 ZF
178
200
YQCNQCKQSFSQRRSLVKHQRIH
ENSCPOP00000016177
C2H2 ZF
206
228
HKCSDCGKAFSWKSHLIEHQRTH
ENSCPOP00000016177
C2H2 ZF
234
256
YHCTKCKKSFSRNSLLVEHQRIH
ENSCPOP00000016177
C2H2 ZF
262
284
HKCGECGKAFRLSTYLIQHQKIH
ENSCPOP00000016177
C2H2 ZF
290
312
FLCVECGKSFSRSSFLIEHQRIH
ENSCPOP00000016177
C2H2 ZF
318
340
YQCKECGKSFSQLCNLTRHQRIH
ENSCPOP00000016177
C2H2 ZF
346
368
HKCEECGKAFSRSSGLIQHQRIH
ENSCPOP00000016177
C2H2 ZF
402
424
YKCDECGKTFSVSAHLVQHQRIH
ENSCPOP00000016177
C2H2 ZF
430
452
YLCTVCGKSFSRSSFLIEHQRIH
ENSCPOP00000016177
C2H2 ZF
458
480
YLCRQCGKSFSQLCNLIRHQGVH
ENSCPOP00000016177
C2H2 ZF
486
508
HKCEECGKAFSRNSGLIQHQRIH
ENSCPOP00000016177
C2H2 ZF
514
536
YKCEKCNKSFSQQRSLVNHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy