ENSCPOG00000020572 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000020572 T090013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.827 1.000
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN

NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.811 0.986
Osr1
M01174_2.00
Mus musculus
GCTACYGT

ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.811 0.986
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.811 0.986
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.811 0.986
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK

MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000020081 C2H2 ZF 172 194
ENSCPOP00000020081 C2H2 ZF 200 222
ENSCPOP00000020081 C2H2 ZF 228 250

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_07376 Aegilops tauschii F775_07376 I 0.000
F775_32858 Aegilops tauschii F775_32858 I 0.000
F775_25840 Aegilops tauschii F775_25840 I 0.000
F775_07845 Aegilops tauschii F775_07845 I 0.000
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.000
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.000
WRKY46 Arabidopsis lyrata fgenesh2_kg.4__2854__AT2G46400.1 I 0.000
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.000
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I 0.000
WRKY46 Arabidopsis thaliana AT2G46400 D 0.000
WRKY70 Arabidopsis thaliana AT3G56400 D 0.000
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I 0.000
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.000
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.000
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I 0.000
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.000
Bo3g039240 Brassica oleracea Bo3g039240 I 0.000
Bo4g009270 Brassica oleracea Bo4g009270 I 0.000
Bo4g101290 Brassica oleracea Bo4g101290 I 0.000
Bra004540 Brassica rapa Bra004540 I 0.000
Bra000423 Brassica rapa Bra000423 I 0.000
Bra014426 Brassica rapa Bra014426 I 0.000
PK21378.1 Cannabis sativa PK21378.1 I 0.000
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I 0.000
Carubv10019489m.g Capsella rubella Carubv10019489m.g I 0.000
Carubv10023578m.g Capsella rubella Carubv10023578m.g I 0.000
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.000
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.000
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.000
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.000
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.000
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.000
GLYMA14G36438 Glycine max GLYMA14G36438 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.000
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I 0.000
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.000
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.000
MLOC_5971 Hordeum vulgare MLOC_5971 I 0.000
MLOC_66134 Hordeum vulgare MLOC_66134 I 0.000
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.000
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.000
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.000
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.000
MDP0000578301 Malus domestica MDP0000578301 I 0.000
MDP0000754989 Malus domestica MDP0000754989 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.000
mgf009193m Mimulus guttatus mgf009193m I 0.000
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.000
OBART05G11710 Oryza barthii OBART05G11710 I 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OB03G26140 Oryza brachyantha OB03G26140 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB05G20210 Oryza brachyantha OB05G20210 N 0.000
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.000
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OLONG_021882 Oryza longistaminata OLONG_021882 N 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.000
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.000
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
OS05G0322900 Oryza sativa OS05G0322900 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.000
Pavir.Ba02544 Panicum virgatum Pavir.Ba02544 I 0.000
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.000
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I 0.000
Pm019286 Prunus mume Pm019286 I 0.000
Pm003015 Prunus mume Pm003015 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm003013 Prunus mume Pm003013 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.000
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.000
29729.m002369 Ricinus communis 29729.m002369 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.000
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.000
Si030531m.g Setaria italica Si030531m.g I 0.000
Si036565m.g Setaria italica Si036565m.g I 0.000
Si022702m.g Setaria italica Si022702m.g I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.000
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000
Traes_7BL_53AA25AA1 Triticum aestivum Traes_7BL_53AA25AA1 I 0.000
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.000
Traes_7DL_A9EF00572 Triticum aestivum Traes_7DL_A9EF00572 I 0.000
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.000
Traes_2DL_362A1F535 Triticum aestivum Traes_2DL_362A1F535 N 0.000
TRIUR3_21738 Triticum urartu TRIUR3_21738 N 0.000
TRIUR3_04352 Triticum urartu TRIUR3_04352 I 0.000
TRIUR3_22128 Triticum urartu TRIUR3_22128 I 0.000
GRMZM2G004060 Zea mays GRMZM2G004060 I 0.000
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.000
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.000