CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM14
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000027176
T090065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Prdm14
M09001_2.00
Mus musculus
NHRGKKCTCTAMCHHN
NDDGKTAGAGMMCYDN
Misc
Kulakovskiy et al.(2013)
PRD14_MOUSE.H11MO.0.A
0.769
0.860
PRDM14
M08897_2.00
Homo sapiens
NRGGWCYCTAACYH
DRGTTAGRGWCCYN
Misc
Kulakovskiy et al.(2013)
PRD14_HUMAN.H11MO.0.A
0.769
0.912
PRDM14
M09509_2.00
Homo sapiens
RSTTAGRGACCY
RGGTCYCTAASY
Misc
Heinz et al.(2010)
H1-PRDM14_GSE22767
0.769
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000015743
C2H2 ZF
315
336
YRCERCGKVFTYKYYRDKHLKY
ENSCPOP00000015743
C2H2 ZF
347
370
FPCSLCKRSFEKRDRLRIHVLHVH
ENSCPOP00000015743
C2H2 ZF
376
398
HKCSTCGKCFSQSSSLNKHMRVH
ENSCPOP00000015743
C2H2 ZF
404
426
YQCVYCAKKFTASSILRTHIRQH
ENSCPOP00000015743
C2H2 ZF
432
455
FKCKFCGKSFASHAAHDSHVRRSH
ENSCPOP00000015743
C2H2 ZF
462
483
RCSTCGKVFSDQEALDSHGKVH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy