ENSCSAG00000001623 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000001623 T090117_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN4
M02919_2.00 		Homo sapiens
YGCACACVCTGWAAR
YTTWCAGBGTGTGCR		 SELEX
Jolma et al.(2013)
ZSCAN4_1 		0.811 0.946
ZSCAN4
M04593_2.00 		Homo sapiens
NHGCACACVCTGNMANN
NNTKNCAGBGTGTGCDN		 SELEX
Yin et al.(2017)
ZSCAN4_eDBD_HT-SELEX 		0.811 0.946
ZSCAN4
M05852_2.00 		Homo sapiens
RCACAYVCTBNMA
TKNVAGBRTGTGY		 SMiLE-seq
Isakova et al.(2017)
ZSCAN4 		0.811 0.946
ZSCAN4
M04594_2.00 		Homo sapiens
NYGCACACMCTGHMAVH
DBTKDCAGKGTGTGCRN		 SELEX
Yin et al.(2017)
ZSCAN4_eDBD_Methyl-HT-SELEX 		0.811 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000016402 C2H2 ZF 312 334
ENSCSAP00000016402 C2H2 ZF 340 362
ENSCSAP00000016402 C2H2 ZF 368 390
ENSCSAP00000016402 C2H2 ZF 396 418

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

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8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action