CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000001623
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000001623
T090117_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN4
M02919_2.00
Homo sapiens
YGCACACVCTGWAAR
YTTWCAGBGTGTGCR
SELEX
Jolma et al.(2013)
ZSCAN4_1
0.811
0.946
ZSCAN4
M04593_2.00
Homo sapiens
NHGCACACVCTGNMANN
NNTKNCAGBGTGTGCDN
SELEX
Yin et al.(2017)
ZSCAN4_eDBD_HT-SELEX
0.811
0.946
ZSCAN4
M05852_2.00
Homo sapiens
RCACAYVCTBNMA
TKNVAGBRTGTGY
SMiLE-seq
Isakova et al.(2017)
ZSCAN4
0.811
0.946
ZSCAN4
M04594_2.00
Homo sapiens
NYGCACACMCTGHMAVH
DBTKDCAGKGTGTGCRN
SELEX
Yin et al.(2017)
ZSCAN4_eDBD_Methyl-HT-SELEX
0.811
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000016402
C2H2 ZF
312
334
YKCEECPKVFKYLCHLLAHQRRH
ENSCSAP00000016402
C2H2 ZF
340
362
FVCPECQKGFFQISDLHVHQIIH
ENSCSAP00000016402
C2H2 ZF
368
390
FTCSVCEKSFSHKTNLRSHERIH
ENSCSAP00000016402
C2H2 ZF
396
418
YTCPHCKRSYRQSSTYHRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy