CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSCSAG00000001976
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000001976
T090183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF528
M08328_2.00
Homo sapiens
GAAATGRCTTCC
GGAAGYCATTTC
ChIP-seq
Schmitges et al.(2016)
Q3MIS6_1-4.RCADE
0.795
0.957
ZNF528
M07617_2.00
Homo sapiens
GMAATGVCTTCCCYB
VRGGGAAGBCATTKC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF528.RCADE.OriginalMapping
0.795
0.957
ZNF528
M08249_2.00
Homo sapiens
SAGAAATGRCTTCC
GGAAGYCATTTCTS
ChIP-seq
Najafabadi et al.(2015b)
ZNF528
0.795
0.957
ZNF528
M08912_2.00
Homo sapiens
NVAGAAATGRCTTCCCTBNN
NNVAGGGAAGYCATTTCTBN
Misc
Kulakovskiy et al.(2013)
ZN528_HUMAN.H11MO.0.C
0.795
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000016058
C2H2 ZF
165
187
YQCNECGKVFSCSSKLVIHRRMH
ENSCSAP00000016058
C2H2 ZF
193
215
YKCHECGKLFSSNSNLSQHQRIH
ENSCSAP00000016058
C2H2 ZF
221
243
YKCHECDKVFRSSSKLAQHQRIH
ENSCSAP00000016058
C2H2 ZF
249
271
YKCHECDKVFNQIAHLVRHQKIH
ENSCSAP00000016058
C2H2 ZF
277
299
YSCNKCGKVFSRHSYLAEHQTVH
ENSCSAP00000016058
C2H2 ZF
305
327
YKCKECGKAFSVRSSLITHQLIH
ENSCSAP00000016058
C2H2 ZF
333
355
YKCKECDKVFGRKCLLTSHQRIH
ENSCSAP00000016058
C2H2 ZF
361
383
YGCNQCGKIFSQKSDLIRHRKIH
ENSCSAP00000016058
C2H2 ZF
389
411
YKCNKCGTAFREFSDLTAHFLIH
ENSCSAP00000016058
C2H2 ZF
417
439
YECKECGKVFRYKSSLTSHRRIH
ENSCSAP00000016058
C2H2 ZF
445
467
YKCNKCGKVFSRSSNLVCHQKIH
ENSCSAP00000016058
C2H2 ZF
473
495
YKCNECGKVFNQASYLTRHQIIH
ENSCSAP00000016058
C2H2 ZF
501
523
YRCNKCGKAFRGRSGLTAHLAIH
ENSCSAP00000016058
C2H2 ZF
529
551
HECKECGKIFTHKSSLTNHHRIH
ENSCSAP00000016058
C2H2 ZF
557
579
YQCTLCIKVFSHNSDLAQHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy