CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000007015
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000007015
T090379_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF398
M07716_2.00
Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData
0.827
0.995
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000003293
C2H2 ZF
343
364
FSCHHCGKSLSQDMLLTHQCSH
ENSCSAP00000003293
C2H2 ZF
399
420
TCPHCARTFTHPSRLTYHLRVH
ENSCSAP00000003293
C2H2 ZF
427
449
FPCPDCPKRFADQARLTSHRRAH
ENSCSAP00000003293
C2H2 ZF
455
477
FRCAQCGRSFSLKISLLLHQRGH
ENSCSAP00000003293
C2H2 ZF
483
505
FSCPQCGIDFNGHSALIRHQMIH
ENSCSAP00000003293
C2H2 ZF
511
533
YPCTDCSKSFMRKEHLLNHRRLH
ENSCSAP00000003293
C2H2 ZF
539
561
FSCPHCGKSFIRKHHLMKHQRIH
ENSCSAP00000003293
C2H2 ZF
567
590
YPCSYCGRSFRYKQTLKDHLRSGH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy