ENSCSAG00000008010 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000008010 T090410_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN31
M04649_2.00
Homo sapiens
GCATAAYTGCCCTGCDDCN

NGHHGCAGGGCARTTATGC
SELEX
Yin et al.(2017)
ZNF323_FL_HT-SELEX
0.787 0.986
ZSCAN31
M08393_2.00
Homo sapiens
ATAAYTGCCCTGCTG

CAGCAGGGCARTTAT
ChIP-seq
Schmitges et al.(2016)
Q96LW9_1-5.RCADE
0.787 0.986
ZSCAN31
M08270_2.00
Homo sapiens
DNVTTAATTGNTTKDD

HHMAANCAATTAABNH
ChIP-seq
Najafabadi et al.(2015b)
ZNF323
0.787 0.986
ZSCAN31
M08958_2.00
Homo sapiens
YMTHMYTGCCCTGCTGMY

RKCAGCAGGGCARKDAKR
Misc
Kulakovskiy et al.(2013)
ZSC31_HUMAN.H11MO.0.C
0.787 0.986
ZSCAN31
M04650_2.00
Homo sapiens
GCATAAYTGCCCYGCDNCM

KGNHGCRGGGCARTTATGC
SELEX
Yin et al.(2017)
ZNF323_FL_Methyl-HT-SELEX
0.787 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000004274 C2H2 ZF 239 261
ENSCSAP00000004274 C2H2 ZF 267 289
ENSCSAP00000004274 C2H2 ZF 295 317
ENSCSAP00000004274 C2H2 ZF 323 345
ENSCSAP00000004274 C2H2 ZF 351 373
ENSCSAP00000004274 C2H2 ZF 379 401

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

Invalid Input OrderBy

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action