CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000008016
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000008016
T090412_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.807
0.988
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.807
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000004279
C2H2 ZF
314
336
HICHECGKSFAQSSGLSKHRRIH
ENSCSAP00000004279
C2H2 ZF
342
364
YECEECGKAFIGSSALVIHQRVH
ENSCSAP00000004279
C2H2 ZF
370
392
YECEECGKAFSHSSDLINHQRTH
ENSCSAP00000004279
C2H2 ZF
398
420
YECDDCGKTFSQSCSLLEHHRIH
ENSCSAP00000004279
C2H2 ZF
426
448
YQCSMCGKAFRRSSHLLRHQRIH
ENSCSAP00000004279
C2H2 ZF
480
502
YKCNECERSFTQNTGLIEHQKIH
ENSCSAP00000004279
C2H2 ZF
508
530
YQCNACGKAFTRISYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy