CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000008192
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000008192
T090422_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.826
0.997
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.826
0.997
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.826
0.997
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.826
0.997
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.826
0.997
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000004450
C2H2 ZF
193
215
YMCVECGKCFGRSSHLLQHQRIH
ENSCSAP00000004450
C2H2 ZF
221
243
YVCNVCGKAFSQSSVLSKHRRIH
ENSCSAP00000004450
C2H2 ZF
249
271
YECNECGKAFRVSSDLAQHHKIH
ENSCSAP00000004450
C2H2 ZF
277
299
HECLECRKAFTQLSHLIQHQRIH
ENSCSAP00000004450
C2H2 ZF
305
327
YVCPLCGKAFNHSTVLRSHQRVH
ENSCSAP00000004450
C2H2 ZF
333
355
HRCNECGKTFSVKRTLLQHQRIH
ENSCSAP00000004450
C2H2 ZF
361
383
YTCSECGKAFSDRSVLIQHHNVH
ENSCSAP00000004450
C2H2 ZF
389
411
YECSECGKTFSHRSTLMNHERIH
ENSCSAP00000004450
C2H2 ZF
417
439
YACYECGKAFVQHSHLIQHQRVH
ENSCSAP00000004450
C2H2 ZF
445
467
YVCGECGHAFSARRSLIQHERIH
ENSCSAP00000004450
C2H2 ZF
473
495
FQCTECGKAFSLKATLIVHLRTH
ENSCSAP00000004450
C2H2 ZF
501
523
YECNSCGKAFSQYSVLIQHQRIH
ENSCSAP00000004450
C2H2 ZF
529
551
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy