CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSCSAG00000008562
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000008562
T090433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.827
0.996
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.827
0.996
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.827
0.996
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.827
0.996
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.827
0.996
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.827
0.996
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.827
0.996
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000004821
C2H2 ZF
122
144
FECSECGKVFSKSSTLNKHQKIH
ENSCSAP00000004821
C2H2 ZF
160
182
YECRECGKAFHQSTHLIHHQRIH
ENSCSAP00000004821
C2H2 ZF
188
210
YECKECGKAFSVSSSLTYHQKIH
ENSCSAP00000004821
C2H2 ZF
216
238
FECNLCGKAFIRNIHLAHHHRIH
ENSCSAP00000004821
C2H2 ZF
244
266
FKCNICEKAFVCRAHLTKHQNIH
ENSCSAP00000004821
C2H2 ZF
272
294
YKCNECGKAFNQSTSFLQHQRIH
ENSCSAP00000004821
C2H2 ZF
300
322
FECNECGKAFRVNSSLTEHQRIH
ENSCSAP00000004821
C2H2 ZF
328
350
YKCNECGKAFRDNSSFARHRKIH
ENSCSAP00000004821
C2H2 ZF
356
378
YRCGLCEKAFRDQSALAQHQRIH
ENSCSAP00000004821
C2H2 ZF
384
406
YTCNICEKAFSDHSALTQHKRIH
ENSCSAP00000004821
C2H2 ZF
412
434
YKCKICGKAFIRSTHLTQHQRIH
ENSCSAP00000004821
C2H2 ZF
440
462
YKCNKCGKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy