CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm9
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000005382
T090811_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000026323
C2H2 ZF
337
360
HACVDCGRSFLRSCHLKRHQRTIH
ENSDARP00000026323
C2H2 ZF
366
388
YCCSQCKKCFSQATGLKRHQHTH
ENSDARP00000026323
C2H2 ZF
405
428
YPCTKCTLSFVAKINLHQHLKRHH
ENSDARP00000026323
C2H2 ZF
509
528
ICTNCEQSFSDLETLKTHQC
ENSDARP00000026323
C2H2 ZF
547
568
YICGECIRAFSNLDLLKAHECI
ENSDARP00000026323
C2H2 ZF
575
598
YCCPHCDLYFNRMCNLRRHERTIH
ENSDARP00000026323
C2H2 ZF
604
626
YCCTVCLKSFTQSSGLKRHQQSH
ENSDARP00000026323
C2H2 ZF
644
667
FPCAYCPFSFTDERYLYKHIRRHH
ENSDARP00000026323
C2H2 ZF
717
739
YLCPDCGKAFSWFNSLKQHQRIH
ENSDARP00000026323
C2H2 ZF
745
767
YTCSQCGKSFVHSGQLNVHLRTH
ENSDARP00000026323
C2H2 ZF
773
795
FLCSQCGESFRQSGDLRRHEQKH
ENSDARP00000026323
C2H2 ZF
801
823
CQCPDCGKSFSRPQSLKAHQQLH
ENSDARP00000026323
C2H2 ZF
829
852
FPCTQCGKSFTRRYHLTRHHQKMH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
0 Related TFs
">No related TF found