CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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glis1b
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000027933
T090871_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.812
0.930
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.812
0.930
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.812
0.930
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.812
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000035545
C2H2 ZF
397
422
QVCRWIDCSAAYEQQEELVRHIEKVH
ENSDARP00000035545
C2H2 ZF
431
458
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSDARP00000035545
C2H2 ZF
465
488
KCMFEGCNKAFSRLENLKIHLRSH
ENSDARP00000035545
C2H2 ZF
494
518
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSDARP00000035545
C2H2 ZF
524
548
YACQIPGCTKRYTDPSSLRKHVKIH
ENSDARP00000120693
C2H2 ZF
65
90
QVCRWIDCSAAYEQQEELVRHIEKVH
ENSDARP00000120693
C2H2 ZF
99
126
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSDARP00000120693
C2H2 ZF
133
156
KCMFEGCNKAFSRLENLKIHLRSH
ENSDARP00000120693
C2H2 ZF
162
186
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSDARP00000120693
C2H2 ZF
192
216
YACQIPGCTKRYTDPSSLRKHVKIH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy