CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
znf148
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000055106
T090953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.810
0.924
ZNF148
M10239_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.810
0.924
ZNF148
M10240_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.810
0.924
Zfp281
M00139_2.00
Mus musculus
NHDCCCCCHH
DDGGGGGHDN
PBM
Badis et al.(2009)
Zfp281_0973
0.757
0.793
ZNF281
M04509_2.00
Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS
SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX
0.757
0.793
ZNF281
M08321_2.00
Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV
ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE
0.757
0.793
Zfp281
M08025_2.00
Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG
ChIP-seq
Chen et al.(2011)
GSE11329_zfp281
0.757
0.793
ZNF281
M08906_2.00
Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV
Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A
0.757
0.793
Zfp281
M08999_2.00
Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG
Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A
0.757
0.793
ZNF281
M10237_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP281_01
0.757
0.793
ZNF281
M04510_2.00
Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY
SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX
0.757
0.793
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000071856
C2H2 ZF
180
202
HICEHCNAAFRTNYHLQRHVFIH
ENSDARP00000071856
C2H2 ZF
208
230
FQCNQCDMRFIQKYLLQRHEKIH
ENSDARP00000071856
C2H2 ZF
236
258
FRCDECGMKFIQKYHMERHKRTH
ENSDARP00000071856
C2H2 ZF
264
287
YQCDYCHQFFSRTDRVLKHRRMCH
ENSDARP00000100768
C2H2 ZF
180
202
HICEHCNAAFRTNYHLQRHVFIH
ENSDARP00000100768
C2H2 ZF
208
230
FQCNQCDMRFIQKYLLQRHEKIH
ENSDARP00000100768
C2H2 ZF
236
258
FRCDECGMKFIQKYHMERHKRTH
ENSDARP00000100768
C2H2 ZF
264
287
YQCDYCHQFFSRTDRVLKHRRMCH
ENSDARP00000106684
C2H2 ZF
180
202
HICEHCNAAFRTNYHLQRHVFIH
ENSDARP00000106684
C2H2 ZF
208
230
FQCNQCDMRFIQKYLLQRHEKIH
ENSDARP00000106684
C2H2 ZF
236
258
FRCDECGMKFIQKYHMERHKRTH
ENSDARP00000106684
C2H2 ZF
264
287
YQCDYCHQFFSRTDRVLKHRRMCH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy