znf148 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000055106 T090953_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.810 0.924
ZNF148
M10239_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.810 0.924
ZNF148
M10240_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.810 0.924
Zfp281
M00139_2.00
Mus musculus
NHDCCCCCHH

DDGGGGGHDN
PBM
Badis et al.(2009)
Zfp281_0973
0.757 0.793
ZNF281
M04509_2.00
Homo sapiens
SCCCCTCCCCCM

KGGGGGAGGGGS
SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX
0.757 0.793
ZNF281
M08321_2.00
Homo sapiens
BNCCCCTCCCCC

GGGGGAGGGGNV
ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE
0.757 0.793
Zfp281
M08025_2.00
Mus musculus
CCCCWCCCCCMVCHB

VDGBKGGGGGWGGGG
ChIP-seq
Chen et al.(2011)
GSE11329_zfp281
0.757 0.793
ZNF281
M08906_2.00
Homo sapiens
BCCCCTCCCCCHNYN

NRNDGGGGGAGGGGV
Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A
0.757 0.793
Zfp281
M08999_2.00
Mus musculus
CCCCTCCCCCMMCBB

VVGKKGGGGGAGGGG
Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A
0.757 0.793
ZNF281
M10237_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP281_01
0.757 0.793
ZNF281
M04510_2.00
Homo sapiens
RCCCMTCCCCCR

YGGGGGAKGGGY
SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX
0.757 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000071856 C2H2 ZF 180 202
ENSDARP00000071856 C2H2 ZF 208 230
ENSDARP00000071856 C2H2 ZF 236 258
ENSDARP00000071856 C2H2 ZF 264 287
ENSDARP00000100768 C2H2 ZF 180 202
ENSDARP00000100768 C2H2 ZF 208 230
ENSDARP00000100768 C2H2 ZF 236 258
ENSDARP00000100768 C2H2 ZF 264 287
ENSDARP00000106684 C2H2 ZF 180 202
ENSDARP00000106684 C2H2 ZF 208 230
ENSDARP00000106684 C2H2 ZF 236 258
ENSDARP00000106684 C2H2 ZF 264 287

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ECANG7_05482 Echinococcus canadensis ECANG7_05482 N 0.000
EmuJ_000768400 Echinococcus multilocularis EmuJ_000768400 N 0.000
GPLIN_000941800 Globodera pallida GPLIN_000941800 I 0.000
maker-nMf.1.1.scaf16231-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16231-snap-gene-0.4 N 0.000
Minc15230 Meloidogyne incognita Minc15230 N 0.000
TASK_0000901601 Taenia asiatica TASK_0000901601 N 0.000
TsM_000643400 Taenia solium TsM_000643400 N 0.000
TTAC_0000435501 Hydatigera taeniaeformis TTAC_0000435501 N 0.000