ikzf5 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000056491 T090956_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within determination of intestine left/right asymmetry; determination of left/right asymmetry in lateral mesoderm; and determination of pancreatic left/right asymmetry. Predicted to be located in nucleus. Is expressed in several structures, including brain; digestive system; eye; pharyngeal arch cartilage; and thymus. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ikzf5
M10347_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IKZF5_02
0.818 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000073468 C2H2 ZF 79 101
ENSDARP00000073468 C2H2 ZF 107 129
ENSDARP00000073468 C2H2 ZF 135 158
ENSDARP00000109784 C2H2 ZF 79 101
ENSDARP00000109784 C2H2 ZF 107 129
ENSDARP00000109784 C2H2 ZF 135 158
ENSDARP00000113181 C2H2 ZF 79 101
ENSDARP00000113181 C2H2 ZF 107 129
ENSDARP00000113181 C2H2 ZF 135 158

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

Invalid Input OrderBy

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action