CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ikzf5
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000056491
T090956_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within determination of intestine left/right asymmetry; determination of left/right asymmetry in lateral mesoderm; and determination of pancreatic left/right asymmetry. Predicted to be located in nucleus. Is expressed in several structures, including brain; digestive system; eye; pharyngeal arch cartilage; and thymus. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ikzf5
M10347_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IKZF5_02
0.818
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000073468
C2H2 ZF
79
101
LKCRYCNYATRGTARLIEHIRIH
ENSDARP00000073468
C2H2 ZF
107
129
HRCHLCPFASAYERHLEAHMRSH
ENSDARP00000073468
C2H2 ZF
135
158
YKCELCSFRCSDRSNLSHHRRRRH
ENSDARP00000109784
C2H2 ZF
79
101
LKCRYCNYATRGTARLIEHIRIH
ENSDARP00000109784
C2H2 ZF
107
129
HRCHLCPFASAYERHLEAHMRSH
ENSDARP00000109784
C2H2 ZF
135
158
YKCELCSFRCSDRSNLSHHRRRRH
ENSDARP00000113181
C2H2 ZF
79
101
LKCRYCNYATRGTARLIEHIRIH
ENSDARP00000113181
C2H2 ZF
107
129
HRCHLCPFASAYERHLEAHMRSH
ENSDARP00000113181
C2H2 ZF
135
158
YKCELCSFRCSDRSNLSHHRRRRH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy