CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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glis1a
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000068580
T090999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.788
0.886
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.788
0.886
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.788
0.886
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.788
0.886
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000124282
C2H2 ZF
127
152
QPCKWMDCRATYGQREELVRHIEKIH
ENSDARP00000124282
C2H2 ZF
161
188
FTCFWAGCVRRHKPFNARYKLLIHMRVH
ENSDARP00000124282
C2H2 ZF
195
218
KCMFEGCNKAFSRLENLKIHLRSH
ENSDARP00000124282
C2H2 ZF
224
248
YICQHPGCLKAFSNSSDRAKHQRTH
ENSDARP00000124282
C2H2 ZF
254
278
YACQLPGCTKRYTDPSSLRKHVKVH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy