sp2 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000076763 T091079_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH

DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.800 0.928
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM

KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.800 0.928
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB

VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.800 0.928
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB

VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.800 0.928
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.800 0.928
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.800 0.928
SP2
M10250_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.800 0.928
SP2
M10251_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.800 0.928
SP2
M10252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.800 0.928
SP2
M10253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.800 0.928
SP2
M10254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.800 0.928
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT

AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.800 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000098588 C2H2 ZF 522 546
ENSDARP00000098588 C2H2 ZF 552 576
ENSDARP00000098588 C2H2 ZF 582 604

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSGMOG00000007030 Gadus morhua ENSGMOG00000007030 I 0.823
ENSLACG00000006434 Latimeria chalumnae ENSLACG00000006434 I 0.820
ENSLOCG00000013729 Lepisosteus oculatus ENSLOCG00000013729 I 0.820
ENSPFOG00000013068 Poecilia formosa ENSPFOG00000013068 I 0.820
ENSONIG00000000117 Oreochromis niloticus ENSONIG00000000117 I 0.820
ENSXMAG00000014321 Xiphophorus maculatus ENSXMAG00000014321 I 0.820
sp2 Gasterosteus aculeatus ENSGACG00000019811 I 0.820
ENSAMXG00000018374 Astyanax mexicanus ENSAMXG00000018374 I 0.820
Ogr12593 Ophisaurus gracilis Ogr12593 I 0.816
sp2 Oryzias latipes ENSORLG00000000102 I 0.816
Pvit_13958 Pogona vitticeps Pvit_13958 I 0.816
sp2 Tetraodon nigroviridis ENSTNIG00000006290 I 0.816
sp2 Takifugu rubripes ENSTRUG00000007642 I 0.816
Alligator_sinensis_CCG014457.1 Alligator sinensis Alligator_sinensis_CCG014457.1 I 0.816
Aan_R002402 Calypte anna Aan_R002402 I 0.815
SP2 Gallus gallus ENSGALG00000000233 I 0.815
SP2 Anolis carolinensis ENSACAG00000006793 I 0.812
ENSPPYG00000008885 Pongo abelii ENSPPYG00000008885 I 0.800
SP2 Procavia capensis ENSPCAG00000002140 I 0.800
SP2 Otolemur garnettii ENSOGAG00000030380 I 0.800
ENSPANG00000022922 Papio anubis ENSPANG00000022922 I 0.800
ENSP00000365931 Macaca fascicularis ENSP00000365931 I 0.800
SP2 Sorex araneus ENSSARG00000003559 I 0.800
ENSSTOG00000015926 Ictidomys tridecemlineatus ENSSTOG00000015926 I 0.800
Sp2 Rattus norvegicus ENSRNOG00000010492 I 0.800
SP2 Oryctolagus cuniculus ENSOCUG00000027415 I 0.800
Myotis_brandtii_SP2_10030436 Myotis brandtii Myotis_brandtii_SP2_10030436 I 0.800
SP2 Pteropus vampyrus ENSPVAG00000004255 I 0.800
SP2 Pan troglodytes ENSPTRG00000009342 I 0.800
ENSNLEG00000002058 Nomascus leucogenys ENSNLEG00000002058 I 0.800
SP2 Cavia porcellus ENSCPOG00000014943 I 0.800
ENSCSAG00000002567 Chlorocebus sabaeus ENSCSAG00000002567 I 0.800
SP2 Equus caballus ENSECAG00000012859 I 0.800
SP2 Erinaceus europaeus ENSEEUG00000014248 I 0.800
SP2 Callithrix jacchus ENSCJAG00000007713 I 0.800
ENSCHOG00000008313 Choloepus hoffmanni ENSCHOG00000008313 I 0.800
ENSAMEG00000004772 Ailuropoda melanoleuca ENSAMEG00000004772 I 0.800
SP2 Bos taurus ENSBTAG00000013740 I 0.800
SP2 Canis familiaris ENSCAFG00000016812 I 0.800
ENSOARG00000007752 Ovis aries ENSOARG00000007752 I 0.800
SP2 Echinops telfairi ENSETEG00000009168 I 0.800
SP2 Myotis lucifugus ENSMLUG00000005000 I 0.800
SP2 Macaca mulatta ENSMMUG00000004765 I 0.800
ENSMPUG00000015289 Mustela putorius furo ENSMPUG00000015289 I 0.800
Sp2 Mus musculus ENSMUSG00000018678 D 0.800
SP2 Loxodonta africana ENSLAFG00000021817 I 0.800
ENSMICG00000014053 Microcebus murinus ENSMICG00000014053 I 0.800
SP2 Gorilla gorilla ENSGGOG00000005330 I 0.800
SP2 Felis catus ENSFCAG00000009365 I 0.800
SP2 Homo sapiens ENSG00000167182 D 0.800
ENSSHAG00000005633 Sarcophilus harrisii ENSSHAG00000005633 I 0.796
SP2 Tursiops truncatus ENSTTRG00000012483 I 0.787
sp2 Xenopus tropicalis XB-GENE-968274 I 0.786
sp2.S Xenopus laevis XB-GENE-968279 I 0.786
SP2 Monodelphis domestica ENSMODG00000012452 I 0.777