PRDM16 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000078324 T091099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm16
M08997_2.00 		Mus musculus
BBCYCTGGGR
YCCCAGRGVV		 Misc
Kulakovskiy et al.(2013)
PRD16_MOUSE.H11MO.0.B 		0.804 0.956
PRDM16
M10223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_03 		0.778 0.925
PRDM16
M10224_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_04 		0.778 0.925
PRDM16
M10225_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM16_05 		0.778 0.925
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000080488 C2H2 ZF 232 253
ENSDARP00000080488 C2H2 ZF 281 303
ENSDARP00000080488 C2H2 ZF 309 331
ENSDARP00000080488 C2H2 ZF 337 360
ENSDARP00000080488 C2H2 ZF 366 388
ENSDARP00000080488 C2H2 ZF 394 416
ENSDARP00000080488 C2H2 ZF 423 444
ENSDARP00000080488 C2H2 ZF 980 1002
ENSDARP00000080488 C2H2 ZF 1008 1031
ENSDARP00000080488 C2H2 ZF 1037 1059
ENSDARP00000107731 C2H2 ZF 12 34
ENSDARP00000107731 C2H2 ZF 40 62
ENSDARP00000107731 C2H2 ZF 68 91
ENSDARP00000107731 C2H2 ZF 97 119
ENSDARP00000107731 C2H2 ZF 125 147
ENSDARP00000107731 C2H2 ZF 154 175
ENSDARP00000107731 C2H2 ZF 711 733
ENSDARP00000107731 C2H2 ZF 739 762
ENSDARP00000107731 C2H2 ZF 768 790

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action