CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FO834877.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000087837
T091156_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000105197
C2H2 ZF
66
88
FTCTQCGKSFATKSKLKIHIMIH
ENSDARP00000105197
C2H2 ZF
94
116
FTCTQCGKSFNQLSHLNYHMMIH
ENSDARP00000105197
C2H2 ZF
122
144
FACTQCAKSFKQSSHLNLHMMIH
ENSDARP00000105197
C2H2 ZF
150
172
FTCTHCGKSFNCSSHLNQHMRIH
ENSDARP00000105197
C2H2 ZF
178
200
YACTQCGKSFNQSSHLNYHMMIH
ENSDARP00000105197
C2H2 ZF
206
228
FTCTQCAKSFNQSSHLNQHMRIH
ENSDARP00000105197
C2H2 ZF
234
256
YACTQCGKSFNCSTNFDNHMRSH
ENSDARP00000105197
C2H2 ZF
262
284
FTCTQCGKSFSQLSNLNLHMMIH
ENSDARP00000105197
C2H2 ZF
290
312
YACTQCGKSFYCSTNLNHHMRIH
ENSDARP00000105197
C2H2 ZF
318
341
FTCTQCGESFSKSSHLNKHIEGTH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BX000477.1
Danio rerio
ENSDARG00000103894
N
0.816
si:ch211-161m3.1
Danio rerio
ENSDARG00000103400
N
0.797
si:dkey-269o24.6
Danio rerio
ENSDARG00000103417
N
0.792