CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm2a
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000090721
T091214_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000104737
C2H2 ZF
1
21
CPRCERRFTSSQDLDRHIQTH
ENSDARP00000104737
C2H2 ZF
31
53
FKCSRCRRTFSTLFSRRRHEKRH
ENSDARP00000104737
C2H2 ZF
707
729
FTCNVCEKPFQSMKILSQHISEH
ENSDARP00000104737
C2H2 ZF
764
787
YVCKTCSKEFAFLCNLEQHQRDLH
ENSDARP00000115208
C2H2 ZF
122
144
IACPRCERRFTSSQDLDRHIQTH
ENSDARP00000115208
C2H2 ZF
154
176
FKCSRCRRTFSTLFSRRRHEKRH
ENSDARP00000115208
C2H2 ZF
971
993
FTCNVCEKPFQSMKILSQHISEH
ENSDARP00000115208
C2H2 ZF
1028
1051
YVCKTCSKEFAFLCNLEQHQRDLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSSCG00000006223
Sus scrofa
ENSSSCG00000006223
N
0.827