CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:dkey-16p19.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000091686
T091233_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000126356
C2H2 ZF
101
123
YTCKQCGKSFYNTGNLTVHMRIH
ENSDARP00000126356
C2H2 ZF
129
151
YTCQQCGKSFYSTGNLAVHRRIH
ENSDARP00000126356
C2H2 ZF
157
179
YSCPQCGKSCKQNGNLEAHMRTH
ENSDARP00000126356
C2H2 ZF
185
207
FICTQCRKGFSQKQNLTIHMRIH
ENSDARP00000126356
C2H2 ZF
213
235
YTCTECGKRFPHKGSLKHHMISH
ENSDARP00000126356
C2H2 ZF
241
263
FACAHCGKSFTTKASLMNHMNGH
ENSDARP00000126356
C2H2 ZF
266
288
TTCDHCGKSLTCKDSIKQHMKTH
ENSDARP00000126356
C2H2 ZF
293
315
FRCSECGKVLKHKRSLINHMKLH
ENSDARP00000134143
C2H2 ZF
101
123
YTCKQCGKSFYNTGNLTVHMRIH
ENSDARP00000134143
C2H2 ZF
129
151
YTCQQCGKSFYSTGNLAVHRRIH
ENSDARP00000134143
C2H2 ZF
157
179
YSCPQCGKSCKQNGNLEAHMRTH
ENSDARP00000134143
C2H2 ZF
185
207
FICTQCRKGFSQKQNLTIHMRIH
ENSDARP00000134143
C2H2 ZF
213
235
YTCTECGKRFPHKGSLKHHMISH
ENSDARP00000134143
C2H2 ZF
241
263
FACAHCGKSFTTKASLMNHMNGH
ENSDARP00000134143
C2H2 ZF
266
288
TTCDHCGKSLTCKDSIKQHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:dkey-30f3.2
Danio rerio
ENSDARG00000098265
N
0.822
AL645691.2
Danio rerio
ENSDARG00000102561
N
0.805
si:dkeyp-82b4.6
Danio rerio
ENSDARG00000100653
N
0.796
BX321871.1
Danio rerio
ENSDARG00000100761
N
0.784
CT027586.2
Danio rerio
ENSDARG00000102770
N
0.771
si:dkey-122c11.7
Danio rerio
ENSDARG00000103721
N
0.769
BX649331.2
Danio rerio
ENSDARG00000104406
N
0.769
BX296567.1
Danio rerio
ENSDARG00000105058
N
0.762