CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:dkey-229b18.3
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000095912
T091365_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable metal ion binding activity. Is expressed in brain; forebrain; hindbrain; and telencephalon. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000124369
C2H2 ZF
890
912
HACLQCRASYRDCDALIMHQIKH
ENSDARP00000124369
C2H2 ZF
918
940
WPCPLCSKTFFRQRNVRNHIRTH
ENSDARP00000124503
C2H2 ZF
138
160
HACLQCRASYRDCDALIMHQIKH
ENSDARP00000124503
C2H2 ZF
166
188
WPCPLCSKTFFRQRNVRNHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000000866
Poecilia formosa
ENSPFOG00000000866
N
0.778