CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:dkey-237m9.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000098281
T091471_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000138927
C2H2 ZF
73
99
SKCNFSSKQRRKTFSQKPKLDVHMRVH
ENSDARP00000138927
C2H2 ZF
105
127
CTCKQCGKSFYTIGNLTVHMRIH
ENSDARP00000138927
C2H2 ZF
133
155
YTCEQCGKSFCQKENFKTHMRIH
ENSDARP00000138927
C2H2 ZF
161
183
YTCQQCGKSFYHAGNLIMHMRIH
ENSDARP00000138927
C2H2 ZF
189
211
YSCPQCGKSFKQNGNLEVHMRTH
ENSDARP00000138927
C2H2 ZF
217
239
FTCTQCGKSFVKKQNLDIHMRIH
ENSDARP00000138927
C2H2 ZF
245
267
YTCTECGKSFTYKSSLKHHMRTH
ENSDARP00000138927
C2H2 ZF
273
295
FGCAQCEKSFSTKSSLMNHMNGH
ENSDARP00000138927
C2H2 ZF
301
323
FTCDQCGIKLTRKDYIRRHMKTH
ENSDARP00000138927
C2H2 ZF
329
351
FRCSECGKGFTHKRSLSAHLKLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:ch211-226o13.2
Danio rerio
ENSDARG00000089875
N
0.821
zgc:174314
Danio rerio
ENSDARG00000100257
N
0.812
si:dkey-16b10.2
Danio rerio
ENSDARG00000101829
N
0.809
zgc:173705
Danio rerio
ENSDARG00000105137
N
0.803
CT573263.2
Danio rerio
ENSDARG00000100001
N
0.800
si:dkey-54j5.2
Danio rerio
ENSDARG00000096189
N
0.800
CT737127.1
Danio rerio
ENSDARG00000090658
N
0.798
CU457778.3
Danio rerio
ENSDARG00000103832
N
0.793