CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BX539341.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000102457
T091797_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000140766
C2H2 ZF
82
104
FSCKQCRKSFSQKPKLDVHMRVH
ENSDARP00000140766
C2H2 ZF
110
132
YTCEQCGKSFGQIQGFKAHMRIH
ENSDARP00000140766
C2H2 ZF
138
160
YTCQQCGKSFYHAGHFAAHMRIH
ENSDARP00000140766
C2H2 ZF
166
188
FSCKQCGKSFSQKSNLDVHMRVH
ENSDARP00000140766
C2H2 ZF
194
216
YTCEQCGKIFSQKQNFKIHMRIH
ENSDARP00000140766
C2H2 ZF
222
244
CTCQQCGKSFRHARNLAVHMRTH
ENSDARP00000140766
C2H2 ZF
250
272
FSCKQCRKSFSKKPNLIAHMRVH
ENSDARP00000140766
C2H2 ZF
278
300
YTCEQCGKSFGQKQDLYIHMRIH
ENSDARP00000140766
C2H2 ZF
306
328
YTCTECGKSFAHKSTLNHHMRTH
ENSDARP00000140766
C2H2 ZF
334
356
FACAQCGKSFTTKTSLKNHMNGH
ENSDARP00000140766
C2H2 ZF
362
384
FTCDQCGKSLTRKDSIKNHMKIH
ENSDARP00000140766
C2H2 ZF
390
412
FRCCKCGKGFKSKRSLNTHMKLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BX511078.1
Danio rerio
ENSDARG00000098371
N
0.824
CR450780.1
Danio rerio
ENSDARG00000091878
N
0.820
CR846087.4
Danio rerio
ENSDARG00000102065
N
0.808