CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLIS2
(
Dasypus novemcinctus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDNOG00000010899
T092140_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.811
0.971
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.811
0.957
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.811
0.957
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.811
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000008454
C2H2 ZF
236
258
HRCPTCNKSFSRLENLKIHNRSH
ENSDNOP00000008454
C2H2 ZF
264
288
YVCPYEGCSKRYSNSSDRFKHTRTH
ENSDNOP00000008454
C2H2 ZF
294
318
YCCKMPGCHKRYTDPSSLRKHIKAH
ENSDNOP00000019872
C2H2 ZF
297
319
HRCPTCNKSFSRLENLKIHNRSH
ENSDNOP00000019872
C2H2 ZF
325
349
YVCPYEGCSKRYSNSSDRFKHTRTH
ENSDNOP00000019872
C2H2 ZF
355
379
YCCKMPGCHKRYTDPSSLRKHIKAH
Links
Other
C2H2 ZF
family TFs
Other
Dasypus novemcinctus
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy