CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp113
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000000945
T092660_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF3
M07613_2.00
Homo sapiens
TCWNTYAKTCADTCA
TGAHTGAMTRANWGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF3.RCADE.ReprocessedData
0.823
0.984
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000000886
C2H2 ZF
194
216
HKCDECSKSFNRTSDLIQHQRIH
ENSDORP00000000886
C2H2 ZF
222
244
YECSECGKAFSQSSHLIQHQRIH
ENSDORP00000000886
C2H2 ZF
250
272
YECQDCGKTFSCSSALILHRRIH
ENSDORP00000000886
C2H2 ZF
278
300
YECHECGKTFSWSSTLTHHQRIH
ENSDORP00000000886
C2H2 ZF
306
328
YACNECGKAFSRSSTLIHHQRIH
ENSDORP00000000886
C2H2 ZF
334
356
YECNECGKAFSQSSHLYQHQRIH
ENSDORP00000000886
C2H2 ZF
362
384
YECMECGGKFTYSSGLIQHQRIH
ENSDORP00000000886
C2H2 ZF
390
412
YECSECGKAFRYSSALVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL001304
Aedes aegypti
AAEL001304
I
0.000
AALB000437
Anopheles albimanus
AALB000437
I
0.000
AARA000223
Anopheles arabiensis
AARA000223
I
0.000
AATE007373
Anopheles atroparvus
AATE007373
I
0.000
ACAC_0000498901
Angiostrongylus cantonensis
ACAC_0000498901
I
0.000
ACEP18350
Atta cephalotes
ACEP18350
I
0.000
ACOC_0000686901
Angiostrongylus costaricensis
ACOC_0000686901
I
0.000
ACOM032922
Anopheles coluzzii
ACOM032922
I
0.000
ACUA021013
Anopheles culicifacies
ACUA021013
I
0.000
ACYPI006350
Acyrthosiphon pisum
ACYPI006350
I
0.000
ADAC010223
Anopheles darlingi
ADAC010223
I
0.000
ADIR006100
Anopheles dirus
ADIR006100
I
0.000
AFAF014224
Anopheles farauti
AFAF014224
I
0.000
AFUN005214
Anopheles funestus
AFUN005214
I
0.000
AGAP009400
Anopheles gambiae
AGAP009400
I
0.000
AMAM013893
Anopheles maculatus
AMAM013893
I
0.000
AMEC007553
Anopheles melas
AMEC007553
I
0.000
AMEM005377
Anopheles merus
AMEM005377
I
0.000
AMIN001798
Anopheles minimus
AMIN001798
I
0.000
ANCCAN_11726
Ancylostoma caninum
ANCCAN_11726
I
0.000
ANCCEY_09818
Ancylostoma ceylanicum
ANCCEY_09818
I
0.000
ANCDUO_06965
Ancylostoma duodenale
ANCDUO_06965
I
0.000
AQUA007907
Anopheles quadriannulatus
AQUA007907
I
0.000
ASIS011483
Anopheles sinensis
ASIS011483
I
0.000
ASTEI07347
Anopheles stephensi
ASTEI07347
I
0.000
A_01819
Schistosoma haematobium
A_01819
I
0.000
BGIBMGA007914
Bombyx mori
BGIBMGA007914
I
0.000
BGLB014127
Biomphalaria glabrata
BGLB014127
I
0.000
CapteG153528
Capitella teleta
CapteG153528
I
0.000
CBG16911
Caenorhabditis briggsae
CBG16911
I
0.000
CBN18412
Caenorhabditis brenneri
CBN18412
I
0.000
Cflo_07896--XP_396918.3_APIME
Camponotus floridanus
Cflo_07896--XP_396918.3_APIME
I
0.000
CJA11067
Caenorhabditis japonica
CJA11067
I
0.000
CLEC003396
Cimex lectularius
CLEC003396
I
0.000
CPIJ004151
Culex quinquefasciatus
CPIJ004151
I
0.000
CpipJ_CPIJ004151
Culex pipiens
CpipJ_CPIJ004151
I
0.000
CRE14575
Caenorhabditis remanei
CRE14575
I
0.000
CRE24092
Caenorhabditis remanei
CRE24092
I
0.000
csin110418
Clonorchis sinensis
csin110418
I
0.000
csin111400
Clonorchis sinensis
csin111400
I
0.000
D915_09414
Fasciola hepatica
D915_09414
I
0.000
D915_09929
Fasciola hepatica
D915_09929
I
0.000
DAPPUDRAFT_57218
Daphnia pulex
DAPPUDRAFT_57218
I
0.000
ENSAMXG00000017630
Astyanax mexicanus
ENSAMXG00000017630
I
0.000
ENSGMOG00000009190
Gadus morhua
ENSGMOG00000009190
I
0.000
ENSLOCG00000007039
Lepisosteus oculatus
ENSLOCG00000007039
I
0.000
NR5A1
Meleagris gallopavo
ENSMGAG00000008342
I
0.000
NR6A1
Pan troglodytes
ENSPTRG00000021357
I
0.000
nr5a5
Takifugu rubripes
ENSTRUG00000003884
I
0.000
GA21254
Drosophila pseudoobscura
FBgn0081242
I
0.000
GF14318
Drosophila ananassae
FBgn0091345
I
0.000
GG21291
Drosophila erecta
FBgn0113470
I
0.000
GH10687
Drosophila grimshawi
FBgn0118168
I
0.000
GI11193
Drosophila mojavensis
FBgn0133954
I
0.000
GL26651
Drosophila persimilis
FBgn0164232
I
0.000
GM23404
Drosophila sechellia
FBgn0178271
I
0.000
GD24312
Drosophila simulans
FBgn0195659
I
0.000
GJ18326
Drosophila virilis
FBgn0205485
I
0.000
GK18731
Drosophila willistoni
FBgn0220729
I
0.000
GE12908
Drosophila yakuba
FBgn0230623
I
0.000
Hr39
Drosophila melanogaster
FBgn0261239
D
0.000
GB45414
Apis mellifera
GB45414
I
0.000
GPLIN_000153900
Globodera pallida
GPLIN_000153900
I
0.000
gw.291.27.1
Branchiostoma floridae
gw.291.27.1
N
0.000
HCOI01334000
Haemonchus contortus
HCOI01334000
I
0.000
HMEL010318
Heliconius melpomene
HMEL010318
I
0.000
HPLM_0001626701
Haemonchus placei
HPLM_0001626701
I
0.000
Hsal_06206--XP_396918.3_APIME
Harpegnathos saltator
Hsal_06206--XP_396918.3_APIME
I
0.000
KGM_16581
Danaus plexippus
KGM_16581
I
0.000
L798_09573
Zootermopsis nevadensis
L798_09573
I
0.000
LCUP003627
Lucilia cuprina
LCUP003627
I
0.000
LDEC010317
Leptinotarsa decemlineata
LDEC010317
I
0.000
LLOJ003991
Lutzomyia longipalpis
LLOJ003991
I
0.000
MDOA005562
Musca domestica
MDOA005562
I
0.000
MESCA000912
Megaselia scalaris
MESCA000912
I
0.000
nDi.2.2.2.g09622
Dirofilaria immitis
nDi.2.2.2.g09622
I
0.000
nDi.2.2.2.g09953
Dirofilaria immitis
nDi.2.2.2.g09953
I
0.000
nDi.2.2.2.g09956
Dirofilaria immitis
nDi.2.2.2.g09956
I
0.000
NECAME_16573
Necator americanus
NECAME_16573
I
0.000
NV13389
Nasonia vitripennis
NV13389
I
0.000
Ocbimv22026489m.g
Octopus bimaculoides
Ocbimv22026489m.g
I
0.000
OESDEN_03668
Oesophagostomum dentatum
OESDEN_03668
I
0.000
PHUM318510
Pediculus humanus
PHUM318510
I
0.000
PPAI007467
Phlebotomus papatasi
PPAI007467
I
0.000
PTRK_0000641400
Parastrongyloides trichosuri
PTRK_0000641400
I
0.000
RPRC002968
Rhodnius prolixus
RPRC002968
I
0.000
Sakowv30012194m.g
Saccoglossus kowalevskii
Sakowv30012194m.g
I
0.000
Sakowv30014378m.g
Saccoglossus kowalevskii
Sakowv30014378m.g
I
0.000
SINV18006
Solenopsis invicta
SINV18006
I
0.000
Sjc_0058250
Schistosoma japonicum
Sjc_0058250
I
0.000
Smp_139360
Schistosoma mansoni
Smp_139360
I
0.000
SMRZ_0001531701
Schistosoma margrebowiei
SMRZ_0001531701
I
0.000
SNAPOd2T00007449001
Oikopleura dioica
SNAPOd2T00007449001
I
0.000
snap_masked-nMf.1.1.scaf00912-processed-gene-0.11
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00912-processed-gene-0.11
I
0.000
SPAL_0001406400
Strongyloides papillosus
SPAL_0001406400
I
0.000
SPAL_0001575000
Strongyloides papillosus
SPAL_0001575000
I
0.000
SPU_004526
Strongylocentrotus purpuratus
SPU_004526
I
0.000
SPU_018845
Strongylocentrotus purpuratus
SPU_018845
I
0.000
SSTP_0000765000
Strongyloides stercoralis
SSTP_0000765000
I
0.000
SSTP_0000923200
Strongyloides stercoralis
SSTP_0000923200
I
0.000
SVE_0979300
Strongyloides venezuelensis
SVE_0979300
I
0.000
SVE_1721900
Strongyloides venezuelensis
SVE_1721900
I
0.000
SVUK_0000929501
Strongylus vulgaris
SVUK_0000929501
I
0.000
T265_03243
Opisthorchis viverrini
T265_03243
I
0.000
T265_07403
Opisthorchis viverrini
T265_07403
I
0.000
TC014986
Tribolium castaneum
TC014986
I
0.000
tetur11g04570
Tetranychus urticae
tetur11g04570
I
0.000
TRE_0001126701
Trichobilharzia regenti
TRE_0001126701
I
0.000
nhr-25
Caenorhabditis elegans
WBGene00003623
D
0.000