Zfp647 (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000003353 T092708_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.815 0.970
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.815 0.970
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.815 0.970
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.815 0.970
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.815 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000003135 C2H2 ZF 177 199
ENSDORP00000003135 C2H2 ZF 205 227
ENSDORP00000003135 C2H2 ZF 233 255
ENSDORP00000003135 C2H2 ZF 261 283
ENSDORP00000003135 C2H2 ZF 289 311
ENSDORP00000003135 C2H2 ZF 319 339
ENSDORP00000003135 C2H2 ZF 345 367
ENSDORP00000003135 C2H2 ZF 373 395
ENSDORP00000003135 C2H2 ZF 401 423
ENSDORP00000003135 C2H2 ZF 429 451
ENSDORP00000003135 C2H2 ZF 457 479
ENSDORP00000003135 C2H2 ZF 485 507
ENSDORP00000003135 C2H2 ZF 513 535

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC102555083 Rattus norvegicus ENSRNOG00000050651 I 0.818
Zfp647 Rattus norvegicus ENSRNOG00000050661 I 0.818
Zfp647 Mus musculus ENSMUSG00000054967 I 0.818
ENSPANG00000017990 Papio anubis ENSPANG00000017990 I 0.816
ZNF250 Pan troglodytes ENSPTRG00000023097 I 0.816
ENSCSAG00000008192 Chlorocebus sabaeus ENSCSAG00000008192 I 0.816
ENSMMUP00000031824 Macaca fascicularis ENSMMUP00000031824 I 0.816
ZNF250 Macaca mulatta ENSMMUG00000011548 I 0.816
ENSPPYG00000018996 Pongo abelii ENSPPYG00000018996 I 0.815
ENSNLEG00000011038 Nomascus leucogenys ENSNLEG00000011038 I 0.815
ZNF250 Homo sapiens ENSG00000196150 D 0.815
ZNF250 Callithrix jacchus ENSCJAG00000021381 I 0.815
ENSGGOG00000010329 Gorilla gorilla ENSGGOG00000010329 I 0.814
ZNF250 Ochotona princeps ENSOPRG00000014807 I 0.814
ENSCPOG00000001490 Cavia porcellus ENSCPOG00000001490 I 0.811
ZNF250 Tupaia belangeri ENSTBEG00000003713 I 0.810
ZNF250 Otolemur garnettii ENSOGAG00000028856 I 0.807
ZNF250 Sorex araneus ENSSARG00000004999 I 0.805
ZNF250 Procavia capensis ENSPCAG00000000092 I 0.802
ZNF250 Erinaceus europaeus ENSEEUG00000004809 I 0.802
ZNF250 Loxodonta africana ENSLAFG00000016670 I 0.799
Myotis_brandtii_ZNF250_10006488 Myotis brandtii Myotis_brandtii_ZNF250_10006488 I 0.798
ZNF250 Felis catus ENSFCAG00000013730 I 0.797
ZNF250 Canis familiaris ENSCAFG00000030799 I 0.797
ENSAMEG00000005352 Ailuropoda melanoleuca ENSAMEG00000005352 I 0.797
ENSSSCG00000027957 Sus scrofa ENSSSCG00000027957 I 0.796
ENSMPUG00000006008 Mustela putorius furo ENSMPUG00000006008 I 0.796
ZNF250 Echinops telfairi ENSETEG00000012126 I 0.794
ZNF250 Pteropus vampyrus ENSPVAG00000002855 I 0.783
ZNF250 Tursiops truncatus ENSTTRG00000013860 I 0.776
ZNF250 Dasypus novemcinctus ENSDNOG00000037059 I 0.760