Zfp647 (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000003353 T092708_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.815 0.970
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.815 0.970
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.815 0.970
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.815 0.970
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.815 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000003135 C2H2 ZF 177 199
ENSDORP00000003135 C2H2 ZF 205 227
ENSDORP00000003135 C2H2 ZF 233 255
ENSDORP00000003135 C2H2 ZF 261 283
ENSDORP00000003135 C2H2 ZF 289 311
ENSDORP00000003135 C2H2 ZF 319 339
ENSDORP00000003135 C2H2 ZF 345 367
ENSDORP00000003135 C2H2 ZF 373 395
ENSDORP00000003135 C2H2 ZF 401 423
ENSDORP00000003135 C2H2 ZF 429 451
ENSDORP00000003135 C2H2 ZF 457 479
ENSDORP00000003135 C2H2 ZF 485 507
ENSDORP00000003135 C2H2 ZF 513 535

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action